Brachypodium distachyon (stiff brome): 100822271
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Entry
100822271 CDS
T01717
Name
(RefSeq) nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100822271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100822271
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100822271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
100822271
NCBI-ProteinID:
XP_003558457
UniProt:
I1H7X7
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All DBs
Position
1:complement(68239417..68249668)
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AA seq
1462 aa
AA seq
DB search
MAWAEDEAIGPDVASAGLHVSERIGRDAAAQPDLEEALEASRYASHPYSSHPKEWPPLVE
VAETRQLPPMLIERYNAAAGEGTALCGIFSEIHRAWATVDNSFYVWRFDKWDGQCQEYHA
DEQAICAVGLARAKPGIFVEAIQYILVLATPVELILVGVCCSASADGADPYAELSLQPLP
EYMISTDGVTMTCITCTDKGQIFLSGRDGHIYELQYTTGSGWRKRCRKVCLTTGLGSLLS
RWVLPNAFKFSAVDPIVDMVIDEERNTIYARTEGMKLQLFDLGANGDGPLKKITEEKNLV
DPRDAPYGGRRPNAPRAVRSPKPSIICISPLSAMESKWLHAVAVLSDGKRLFISTSGGSS
SSVGLNNGLQRPSCLKIVATRPSPPLGVGGGLTFGAVSAAGRAQPEDLALKVESAFYSAG
ALIMSDSSATAMSSLLAVQKDSAAQLSLPSTFASASRSSRALRETVSALPVEGRMLCASD
VFPLPDAASIMQSLYADVECFSAFRKPSEKASIKLWAKGDLPTQHILPRRRIVVFNTMGL
MEVVFNRPVDILRKLFDGNTLRSQIEEFFNRFGAGEASAMCLMLAAKLLYAEDSLISNAV
SEKAAEAFEDPGLVGMPQLNGTTALSNTRTQAGGFSMGQVVQEAEPLFSGAYEGLCLCSS
RLLYPVWELPVMVVRGLLGPNDHGDGVVVCRLSTGAMKVLESKIHSLETFLRSRRNKRRG
LYGYVAGLGDSGSILYKTGPIIGTGVCNNGKSPYRIRDTDSADQSASNKKPRSLYTSAEL
AAMEVRAIECLRRLLRRSGEALILLQLICQHNVARLVQTLGSDLRKKLVQLTFHQLVCSE
DGDQLAMRLISSLMEYYVGPEGRGTVDEISTKLREGCPSYFNESDYKYYSAVEFLERASM
TNNHDERDVLARDAFNLLTKIPDSADLSAICKRFENLRFYEAVVRLPLQKAQALDSNADV
INGQIDARHHDTITAQRVQCYEIVMNALRTLKGAGRSGAPGPVIALDPASRSKCIKQIIQ
LSVQWPDTVFHEHLYRTLIELGLDNELLEYGGPDLVAFLQSAGRKHQEEVRGAPRPADLG
APISTTQTKYLELLARYYVLKGEHIAAARMLLILAERQCSNVEEAPVLDQRYQYLSNAVL
QAKSAGIAADSSRNPIDSSTVDLLEGKLAVLRFQMQIKQELESMASQLETIPGSFESSSD
PFPHDNILADAESAKVAKDKAKELSLNLKSITQLYNDYAVPFNLWEVCLEMLNFANYSGD
ADSKIVREIWARLLDQTLTRGGVAEACSVVKRVGSKLDPADGACLPLDIICLHLEKAALD
RLSSGEELVGDEDVARALLGACKGLAEPVLAVYDQLLSNGAIVPSLNLKLRLLRSVLAIL
REWGMSVITHKLGTTTAGASFFQDGTFSLNQTGSLNQGVRDKIISLANRYMTEVRRLNLP
QNQTDNVYRGFRDLEEKLLSPY
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgggcggaggacgaagccattggccccgacgtagcctcagcgggtctgcacgtc
tcggagcggatcggccgcgatgccgccgcgcagcccgacctggaggaggcactagaggcc
tcgcgctacgcttcccatccctactcctcgcaccccaaggagtggcctcctctggtggaa
gttgcagaaactcggcagctacctcctatgctgattgaaagatataatgcagctgctggt
gaaggaacagccctttgtggaatattttctgaaatacaccgggcttgggcaaccgttgac
aattcattctatgtctggcgcttcgataagtgggatggccaatgtcaagagtatcatgca
gatgagcaagcaatttgtgctgtcgggcttgctagagcaaagcctgggatttttgttgaa
gcaattcaatacattttagttttagcaactcccgtggagctgatacttgttggagtttgc
tgttctgctagtgctgacggagcagatccatacgctgagctttcattgcaacctttaccc
gagtacatgatttctactgatggtgtcacaatgacgtgcatcacatgtacagataagggt
caaattttcctgtccggacgtgatgggcatatatatgaattgcaatacacaactggttca
ggctggcgtaaacgctgccgtaaagtctgccttaccactggtttaggcagtcttctttcc
agatgggtcctgccaaatgcatttaaattctcagccgttgatcctattgtggatatggtt
attgatgaggagaggaacactatatatgcacgcacagaaggcatgaaattgcaactattt
gatttaggagctaatggtgatggtcctttaaaaaagatcactgaagaaaagaaccttgtt
gatccacgagatgcaccttatggtggtcggaggcctaatgcaccaagggctgtaagatcc
ccaaaaccgtcgattatatgcatctcacctttatcggccatggaatcaaaatggctccat
gctgttgctgttttatcagatggcaagagattgttcatttctacctcaggtggaagcagt
tcttcagttggactgaacaatggtttgcagaggccaagctgtttaaaaattgttgcaact
aggccttctccacctctaggtgttggtggtggactcacatttggtgctgtttctgctgct
ggcagagctcagcctgaggatctggcactgaaagtggagtctgctttctattctgccggt
gctcttataatgtcagattcatctgctacagctatgtcctcccttctagctgtgcagaaa
gattcagctgcccaattatccctccctagcacctttgcatcagcttctagaagctctagg
gctcttcgggagacggtctctgctttgcctgttgagggtcggatgctttgcgcctccgat
gttttcccgcttccagatgctgcttcaatcatgcagtctttatatgccgatgttgaatgc
ttttcagctttcaggaaaccttctgagaaggcttctataaaactgtgggccaaaggggat
cttcctacccaacatatcttacctcggaggaggattgtagtattcaatacaatgggtttg
atggaagtggtttttaacaggcctgttgacatcctaagaaaattgtttgatgggaacacc
ctgagatcacaaatagaagagttttttaaccgttttggtgctggagaggcttcagcaatg
tgcttaatgctagctgcaaagttactttatgctgaagatagtctgatcagcaatgcagtt
tctgagaaagctgctgaagcatttgaggaccctggacttgttgggatgcctcaacttaat
ggcactactgctctgtctaacactcgaactcaggctggaggctttagtatgggacaagtt
gttcaggaagcagaacctttgttttctggtgcatatgaagggctttgcttatgctcatcg
aggctgttgtatcctgtgtgggaacttccagttatggtggttcgaggattgctaggtccg
aacgatcacggggatggtgtggttgtttgcaggctttctactggtgccatgaaggttctc
gagagtaagattcattcattggaaacgtttttgaggtccagaagaaacaagagaagagga
ctttacgggtatgttgctggcctgggagattctggctccatactgtacaaaacagggcca
atcattggcactggtgtctgtaacaacggaaagagcccctaccgcattagagatacggac
tctgcagatcaatctgcatcgaataagaagcctcggtcgctttatacatccgcagagcta
gctgctatggaggtgagggcaattgagtgtcttcggcggttgcttcgtagatctggggaa
gcactcattctgcttcaacttatctgtcagcataatgttgctcgcttggttcagacacta
ggcagtgatttgcgcaagaagttagttcaattaacgtttcatcagttggtatgttctgag
gacggcgaccagcttgcgatgcggcttatttcttcactcatggagtactatgttggtcca
gagggcagaggaactgttgatgagatcagcactaaactgagggagggctgtcctagctac
ttcaacgagtcagattataagtattactcagcagtggaatttcttgagagagcatctatg
acaaacaatcatgatgagagagatgttcttgctagagatgccttcaatctcttgaccaaa
attccagactctgctgatttgagtgctatatgcaagagattcgagaacctacgattctat
gaggctgtagtgcggttgccgctacagaaagctcaagcccttgattccaatgctgatgtt
atcaatgggcaaattgatgcaaggcatcatgatactataactgcacagcgtgtacaatgc
tatgaaattgttatgaatgctctgcgtaccctcaaaggtgctggacgaagtggggcacct
ggtccagtgattgcccttgatccagcttctcgaagcaaatgtatcaaacagattattcag
ctaagtgtccagtggccggacacagttttccacgagcatctttacaggacacttattgag
ctcggtctggataatgaacttttggagtatggaggccctgatttggttgcttttcttcag
agtgctggtcggaagcatcaagaagaggttcgaggagctcctaggccggctgatttaggc
gcacctatttctaccactcaaacaaagtatcttgagctcctagctagatactatgttctc
aagggtgaacatattgctgctgccaggatgctattgatattggcagaaaggcagtgctcc
aatgtagaagaagctcctgttcttgatcagaggtatcaatatctgagcaatgcggtgcta
caggccaaaagtgcaggcattgcggctgattcatcgagaaatcctattgatagtagtacg
gttgatctacttgaaggcaaacttgcagtgcttcggttccaaatgcaaataaaacaagaa
ttggagtctatggcttcgcagcttgaaactatcccaggcagttttgaatcatccagtgac
ccctttcctcatgataatattctagctgatgcggagtctgccaaagttgccaaggacaag
gcgaaagagctttcacttaatcttaaaagtattactcaactatacaatgactatgcagtt
ccatttaatctttgggaggtttgcctggaaatgctcaactttgcaaattactctggagac
gctgatagcaaaattgttcgggaaatttgggcccgactccttgaccagacacttacaaga
ggtggtgttgcagaagcatgttctgtggtgaagagagttggttcaaaacttgatcctgca
gatggagcttgtttacctttggatataatatgccttcatcttgagaaagctgcattggat
aggttaagttcaggagaagaattagttggtgatgaggatgtcgcaagagcccttcttgga
gcctgtaaaggtctagcggaacccgtgcttgctgtgtatgatcaactgttatcgaatggt
gcaattgtgccctcacttaatctgaagctgcgccttctaagatcagttcttgcaatcctt
cgtgaatggggaatgtcggtcattacacataagctgggcaccacaactgctggggcttca
ttctttcaggatggaacattttcgctgaatcaaacagggtctttaaatcaaggagttcga
gataaaataattagtttagccaacaggtatatgactgaggtgaggcgattaaacctgcca
cagaaccaaacagataatgtctaccgaggtttccgcgacctagaggagaagttattatct
ccttattag
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