Brachypodium distachyon (stiff brome): 100822426
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Entry
100822426 CDS
T01717
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100822426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100822426
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100822426
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
100822426
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
100822426
NCBI-ProteinID:
XP_010231576
UniProt:
I1HKR1
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Position
2:complement(31308764..31313934)
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AA seq
348 aa
AA seq
DB search
MDIDSVECLSLPDASMDVDDVDRHHNHHHHHGIPLHAVHLAASGGAGGRAFPKVNAGGGA
GGAGGAGVIVGAAGGPPATSVHELLECPVCTNSMFPPIHQCQNGHTLCSTCKARVHNRCP
TCRQELGDIRCLALEKVAESLELPCKYCSLGCPEIFPYYSKIKHEAQCSFRPYNCPYAGS
ECAVAGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCL
HFEAFQLGMAPVYMAFLRFMGDENEARNYTYSLEVGGNGRKMVWEGTPRSIRDSHRKVRD
SHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQPNPDGTCIPNLCS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggacatagacagcgtggagtgcctctccctcccggacgcctccatggacgtggacgac
gtcgacaggcaccacaaccatcaccatcaccacggcatcccgctccacgccgtgcatctg
gccgctagcggcggcgccgggggccgcgcgttccctaaggttaatgctgggggcggggcc
ggcggcgcgggaggagccggcgttatagtgggcgccgccggtgggccaccggcgaccagc
gttcacgaactgctcgagtgccccgtctgcaccaactccatgtttccgcccatccaccag
tgccagaatggacatacattatgttcaacatgcaaggctagggtgcacaatcgttgccct
acatgcagacaagagcttggtgatatcaggtgcttggcgttggagaaagtagcagaatca
ctcgagcttccttgtaagtactgctctttaggttgtccagagatcttcccatactacagc
aagataaagcatgaagcacagtgcagcttcaggccatataactgcccctatgctggttct
gaatgtgctgtggctggtgatatacctttccttgttgcacatttgagggatgatcacaaa
gttgatatgcacagcggttgcacattcaaccatagatatgtcaagtctaatccgagagag
gttgaaaatgccacctggatgctaacagtgttccattgtttcggacagtacttctgtctg
cactttgaggccttccagcttggcatggcacctgtatacatggctttcctccgtttcatg
ggggacgagaatgaagcaaggaactacacctacagcctcgaggttggtggtaatggtagg
aagatggtatgggagggcacccctagaagcattcgtgacagccaccggaaggtccgggac
agccatgatggcctcatcatccagaggaacatggcattgttcttctccggcggtgacagg
aaggagctgaagctgagggttaccgggcggatatggaaagagcagcccaacccagatgga
acctgcataccgaacctctgtagctga
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