KEGG   Brachypodium distachyon (stiff brome): 100822535
Entry
100822535         CDS       T01717                                 
Name
(RefSeq) splicing factor U2af small subunit B
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100822535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bdi03041]
    100822535
Spliceosome [BR:bdi03041]
 Complex A
  U2 snRNP components
   U2 related factors
    100822535
 Complex B
    100822535
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 zf-CCCH_4 HATPase_c PqqF-like_C_4
Other DBs
NCBI-GeneID: 100822535
NCBI-ProteinID: XP_003567899
UniProt: I1HGE5
LinkDB
Position
2:complement(14532023..14548338)
AA seq 308 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTTSPTIVLANMYQRPDMITP
GVDAQGHTIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEE
QAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL
RRKLYGGRSRRSHGRSRSPSPQHRRDNRDRGGDFRREGRDGYRGGGGDGGYRGGDGGGYR
GGDGGGYRGGGGGGRRGGGGRGYDRYDDGGRRRHGGSPPRRGRSPVRENSEERRAKIEQW
NRDREEKK
NT seq 927 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcatcaatttttggtactgagaaggacagggtcaactgccccttt
tacttcaagattggagcatgccgccatggggatcgctgctcccgtctgcacaacaggcca
accacgtcgccaactattgtgcttgctaacatgtaccagcgccctgatatgatcacccca
ggagttgatgcgcaaggtcacactattgatcctgagaagatgcaggagcactttgaggac
ttctatgaggatatctatgaagagctgagcaagtttggtgaagttgagaccctgaatgtg
tgtgacaatcttgctgatcacatgatcgggaatgtctatgtccagttcagggaggaagaa
caggccgtcgctgctcacaatgccctccaaggccgcttttactctggccgcccaattatt
gttgagtattcccctgtgaccgacttccgtgaagcaacctgtaggcagtttgaggagaac
agctgcaaccgtggtggctactgtaacttcatgcatgtgaagcagattggcagagaactc
cggaggaagctgtatgggggacgttcccggaggagccacgggagaagccgcagcccaagc
ccgcaacacaggagggacaatcgtgaccgtggtggtgacttccgccgtgaaggtcgtgat
ggctaccgtggtggcggcggtgatggtggttaccgtggcggtgatggtggtggctaccgt
ggcggtgatggtggtggctaccgtggagggggtggtggtggacggaggggtggaggtggc
agggggtatgacaggtacgatgatggaggaagacgcaggcatggtggcagcccaccaagg
cgtgggaggagccctgtcagggaaaacagtgaggagcgcagggccaagattgagcagtgg
aaccgcgatcgggaggaaaagaagtga

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