Brachypodium distachyon (stiff brome): 100822727
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Entry
100822727 CDS
T01717
Name
(RefSeq) FACT complex subunit SSRP1-A isoform X2
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bdi03000
]
100822727
03036 Chromosome and associated proteins [BR:
bdi03036
]
100822727
Transcription factors [BR:
bdi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
100822727
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
100822727
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
HMG_box_5
DUF6209
YL1
Motif
Other DBs
NCBI-GeneID:
100822727
NCBI-ProteinID:
XP_003564523
UniProt:
A0A0Q3FUR0
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Position
2:3928522..3934530
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AA seq
637 aa
AA seq
DB search
MSDGHLFNNILLGGRGGTNPGQFKVHPGGLSWKKQGGNVIHIDKVDVTSVTWMKIPRCYQ
LKIRTTDGLVYMFSGFREQDTSNLTNFMQKNMGILPDEKQLSVTGHNWGGIDIDGSTLTF
MVGSKQAFEVSLPDVAQTQMQGKTDVLLEFHVDDTTGANEKDSLMELSFHVPMSNTQFVG
DENRSSAQILWETILGEVDAGSSEAAVSTFEGIAILTPRGRYNVELHLSYLRLQAQANDF
KIQYTSIVRLFILPKSNNPHTMVVVTLDPPIRKGQTLYPHIVIQFETETVVEINVKLSTE
LLAEKYKDRLEESYQGLIHEVFIKVLRGLSAAKVTRPGSFRSSQDGYAVQSSLKAEDGLL
YPLEKGFFFLPKPPTLILDEEIEFVEFQRLGARGAGMSSHNFDLLVKLKNDQEHLFRNIR
RSECQNLSNFINGKHLKMMNLGDGQGTSGGVTDVIHDSGDDTVDPHLERIKNQAGDEESD
EEDEDFVLDKDDGGSPTDDSGGDESDASESGDEKEKSSGKKASSSKPPAKRKPKGGEGED
SEKRKRKSKKDPNAPKRAMTPFLCFSISERAAVKGSNPDLHSNEITKKLGLMWQKMSTQE
KQPYIQQSLVDKKRYEEESAAYLGANLADEDPISADD
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacggccacctcttcaacaacattctactcggaggccgcggcggcacgaatcct
ggtcagtttaaagtgcatcctggagggctttcatggaagaaacaaggaggaaacgtgatc
cacattgataaagttgatgtaacttctgtgacatggatgaaaatccccagatgttatcag
cttaaaatcaggaccacagatggcctggtttacatgtttagtggttttcgcgaacaggat
acaagcaacctgaccaacttcatgcaaaagaatatgggcatcttaccagatgaaaaacag
ctctctgttaccggtcataactggggagggattgatatagatggaagcacgctcaccttt
atggttggttcaaagcaagcatttgaagtttctctaccagatgtcgcacaaacccagatg
caaggcaaaacagatgttctcttggagtttcatgttgatgatactactggggctaatgag
aaagattcgctcatggagttgagttttcatgtacctatgtcaaatactcaatttgttgga
gacgagaaccgctcgtcagcccagattctgtgggaaacaatactgggagaagttgatgct
ggttcttctgaagcggcagtttccacctttgaagggatagctattcttacacccagagga
cgatacaatgttgagcttcatctttcatatctgcgactccaagcacaagctaatgatttt
aaaatccaatacaccagcattgttcgcctctttattttgccaaagtcaaacaatcctcat
acaatggtggttgtcactcttgatccgccaatccgtaaaggccaaacgctgtaccctcac
attgttattcagtttgagacagagacagtagttgaaataaatgtgaaattaagcacagag
cttctggctgaaaaatacaaagataggttggaggaatcttatcagggtctaatacatgag
gtattcatcaaagttctgcgtggtctatctgctgctaaagtcacaaggccgggttctttc
agaagttcccaagatggatatgcagttcaatcatcactgaaagctgaagatggactgttg
tacccacttgaaaagggtttcttctttcttccgaagccccctacgctcattctagatgaa
gagattgagtttgttgaattccaacgccttggtgctcggggtgccggtatgtcatctcac
aattttgacctcctggtaaagttaaaaaatgatcaagagcatctcttcagaaatattcga
aggagtgaatgccagaacctctcgaactttatcaatgggaagcacttgaaaatgatgaac
cttggagatggtcaaggtacaagtggtggggttacagatgttatacatgactccggtgat
gatactgttgatccacatctagagcgaataaaaaatcaggccggggatgaggaaagtgat
gaagaggatgaagattttgttctggataaagatgatggcggatctcctactgatgattct
ggtggagatgaatcagatgctagtgaaagtggggatgaaaaggagaaatcatccggaaag
aaagccagcagttcaaagccacctgcgaagaggaagcctaagggtggggaaggcgaagat
tcagagaaaaggaaacggaagagcaagaaagatcctaatgcccctaaaagagcaatgaca
ccattcttgtgtttctcaatttctgagcgagcagctgtgaagggtagcaatcccgattta
cattcaaacgagatcacaaagaagctcggactgatgtggcagaagatgtcaacccaagag
aaacaaccttacatccagcagtccctggtcgacaagaaacgctacgaggaggagtccgcg
gcctaccttggcgccaatctggcggacgaggaccccatatccgccgacgactag
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