KEGG   Brachypodium distachyon (stiff brome): 100822760
Entry
100822760         CDS       T01717                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-1
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03010  Ribosome
bdi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    100822760
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100822760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:bdi03011]
    100822760
   04121 Ubiquitin system [BR:bdi04121]
    100822760
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bdi04147]
    100822760
Ribosome [BR:bdi03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    100822760
  Archaea
    100822760
Ubiquitin system [BR:bdi04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   100822760
Exosome [BR:bdi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100822760
  Exosomal proteins of colorectal cancer cells
   100822760
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N TBK1_ULD Ubiquitin_5 VCIP135_N DUF2604 IBR Plexin_RBD UBL_UBAC1
Other DBs
NCBI-GeneID: 100822760
NCBI-ProteinID: XP_003571935
UniProt: I1I505
LinkDB
Position
3:complement(31525656..31526473)
AA seq 158 aa
MQIFVKTLTGKTITLEVESSDTIENVKAKVQDKEGVPPEQQRLIFAGKQLEDGRTLADYN
VQKESTLHLVLRLRGGAKKRKKKTHTTPKKAKHERTKTELAVLGLYRVDEATGAVERLRK
ECPNPECGAGTFMAAHADRLACGKCGLTYAKSQGPEVV
NT seq 477 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagacgctgacggggaagacgatcacgctggaggtggagtcatcg
gacacgatcgagaacgtgaaggccaaggtgcaggacaaggagggggtcccgccggagcag
cagcggctcatcttcgccgggaagcagctggaggacgggcgcacgctggccgactacaac
gtccagaaggagtccaccctccacctcgtcctccggctccgcggcggcgccaagaagcgc
aagaagaagacgcacaccacgcccaagaaggccaagcacgagcgcacgaagaccgagctc
gccgtgctggggctataccgggtggacgaggcgacgggggcggtggagcggctgcggaag
gagtgccccaacccggagtgcggcgccgggaccttcatggcggcgcacgccgaccgcctc
gcctgcggcaagtgcggcctcacctacgccaagagccagggcccggaggtggtttga

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