Brachypodium distachyon (stiff brome): 100822881
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Entry
100822881 CDS
T01717
Name
(RefSeq) RAN GTPase-activating protein 2
KO
K14319
Ran GTPase-activating protein 1
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100822881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100822881
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100822881
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WPP
LRR_6
LRR_4
LRR_14
NPIP
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
100822881
NCBI-ProteinID:
XP_003574505
UniProt:
I1I783
LinkDB
All DBs
Position
3:38512497..38516159
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AA seq
551 aa
AA seq
DB search
MDSIAQDFQPRTFSIKLWPPSESTRLMLVERMTKNLSNESIFSRKYGLLGKEEAHENAKR
IEDMCFASADEHFKKEPDGDGSSAVQLYAKETSKLMLDVLKRGPKTTVEPEAPVIDTPPE
PADTVFDISGGKRAFIEAEEAKELLSPLTKPGNSYKRICFSNRSFGIGAANVAGPILESI
KTQLTEVDISDFVAGRPEDEALDVMRIFSRALEGSVLRYLNISDNALGEKGVRAFKELLE
SQGNLEELYVMNDGISEEAAKALSELIPSTEKLKVLHFHNNMTGDEGAMSIAEMVKRSPN
LESFRCSATRIGSDGGVALAEALGTCTHLKKLDIRDNLFGVEAGVALSKTLPKLHDLVEL
YLSDLNLENEGTVAIVNVLKLSAPQLEILEMAGNEITAEATQDIAACLKAMQSLKKLTLA
ENELKDAGAVVIAQSLEGGHADLKELDVSTNMFQRAGARCFAQAITNKPGFMQLNINGNF
ISDEGIDEVKAILKGGKNSLEVLGPLDENEPDGEQEYDDEEEDGSDGDGQVENGEDGLDT
KLQHLKVEQDD
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggattcaatagctcaagatttccagccccggacattctccatcaaactatggccacca
agtgaaagcactcgtttgatgctagtggagaggatgaccaagaacctgtccaatgagtca
atcttttctcgcaagtatggccttctgggcaaagaagaggcccacgagaatgctaaaagg
attgaagatatgtgctttgcttctgcagatgagcatttcaagaaggagcctgatggtgat
gggagttctgcagtccagctatatgcaaaagaaactagtaagctgatgctggatgtcctg
aaaagaggcccaaagacaaccgtggaaccagaagcacctgttattgatacacctcctgag
cctgctgatactgtgtttgatatatcaggtggcaaacgtgcctttattgaagcagaagaa
gcaaaggagctactgagtcccctaacaaaaccaggaaactcatacaaaaggatctgcttc
agcaacaggagctttggtattggtgctgccaatgttgctgggccaattcttgaatctata
aagacgcagctcacggaggtagatatctcagattttgttgctggaaggcctgaggatgaa
gctcttgatgtgatgcgcatattctccagagcattagagggatccgtactgagatacctg
aatatctctgataatgctttaggcgagaagggtgtcagggcattcaaagagctcctggaa
tcacagggcaacctggaagaactatatgtgatgaatgatggtatatcagaggaagctgca
aaagctctatctgagcttattccttcgactgagaagctgaaggttcttcacttccacaac
aatatgactggagatgaaggagcaatgtcaattgctgagatggttaagcgttccccaaat
ctggagagttttaggtgctcagcgacaaggataggttctgatggcggggtggcattggct
gaggcgctagggacctgtactcatctgaagaaacttgacatcagggataacttattcggt
gttgaggctggggtagctctcagcaaaacgcttccaaagcttcatgatctcgttgagctg
tacctcagtgacctcaatcttgagaacgagggtacagtagcaattgtgaatgtcctcaag
ctgtcagcacctcagttggagatccttgaaatggccggaaatgaaataacggctgaagca
acccaagatatagcagcatgcctgaaagcaatgcaatccctcaagaagctgaccctggct
gagaatgaactgaaggatgctggtgcagtggtcattgctcaatcattggagggaggccac
gcagatctgaaggagcttgatgtgagcacaaatatgttccagagggctggagctcggtgc
tttgctcaagcaatcacaaacaaaccaggttttatgcagctgaatatcaatgggaatttc
atatctgatgaagggattgatgaggtcaaggcaattctgaagggcggtaagaactcgctg
gaagtgcttggcccattggatgaaaatgaacctgatggggagcaggaatatgatgatgag
gaagaggatgggagtgatggcgatggtcaggttgagaatggggaggatggtctggacacg
aagctgcagcatctgaaggtggagcaggatgactag
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