Brachypodium distachyon (stiff brome): 100823085
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Entry
100823085 CDS
T01717
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03013
Nucleocytoplasmic transport
bdi03015
mRNA surveillance pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100823085
09122 Translation
03013 Nucleocytoplasmic transport
100823085
03015 mRNA surveillance pathway
100823085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100823085
03041 Spliceosome [BR:
bdi03041
]
100823085
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
100823085
Spliceosome [BR:
bdi03041
]
Common components
Common spliceosomal components
Cap binding complex
100823085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5721
Inhibitor_I53
Motif
Other DBs
NCBI-GeneID:
100823085
NCBI-ProteinID:
XP_003575342
UniProt:
I1IBI1
LinkDB
All DBs
Position
3:complement(49719103..49725112)
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AA seq
240 aa
AA seq
DB search
MASLFKDPSKLSVYRDRRFSGTQEEFEAALLASLTVYVGNMSFYTTEEQAYELFTRAGEI
KKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYISGTMLDDRPIRVDFDWGFEEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKMVQKELEAQRELVDYGVGFQTNAPPQYDRADRKRG
YSDRNDRDYQRRRSAPDMSRRAPDSDSRKDANQEPEKNPRFREKGDSDDEDDDYDKKRRR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccctcttcaaggacccgagcaagctctcggtgtacagggaccggcggttctct
gggacgcaggaggagttcgaagcggcgctactagcgtcgctgacggtgtacgtggggaac
atgtccttctacaccacggaggagcaggcgtacgagctcttcacccgggctggcgagatc
aagaagatcatcatgggcctcgacaagaacacaaagaccccctgcggcttctgcttcgta
ctgtattactccagggaagatgcagaagatgcagtcaaatatattagtggcacaatgctt
gatgatcgcccaatccgtgttgattttgattggggctttgaagaaggcaggcaatggggc
cgtggaaggagcggtggacaagtcagagatgagtaccgcacggattatgatcctggaaga
ggtggctatggtaagatggttcagaaagagctggaagcacaaagagaattagttgactat
ggtgtaggctttcaaacgaatgctccacctcagtatgatcgagctgaccggaagagagga
tacagcgaccggaatgacagagattaccaacggagaagatctgcaccagatatgtccagg
agagcacccgactccgattctcggaaggatgcaaatcaagagcctgagaagaatcctaga
tttcgcgagaaaggtgattctgatgatgaagatgacgattatgataagaaacgacggcgc
taa
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