Brachypodium distachyon (stiff brome): 100823150
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Entry
100823150 CDS
T01717
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04120
Ubiquitin mediated proteolysis
bdi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100823150
04120 Ubiquitin mediated proteolysis
100823150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100823150
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100823150
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100823150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
100823150
NCBI-ProteinID:
XP_010230738
UniProt:
I1HE60
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Position
2:complement(7869379..7880874)
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AA seq
509 aa
AA seq
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MIRLQTYAAFSLLATTTAVYYAFSSRVQFYPAVVYLSSSKICFVLLLNTGLVAMCVAWQL
VKRVFLGKLREAEVERLNEQSWREVVEILFAVTIFRQDFSVAFLAMVAALLLVKALHWLA
QKRVEYIETTPSVPMLSHLRIVSFMVFLLAVDCIFLSNSLMSLIKNWEASVAIFFSFEYM
ILATSTVSTFMKYVFYVSDMLMEGQWEKKAVYTFYLELISDLVHLSLYMLFFIAIFLNYG
VPLHLIRELYETFRNFRIRVSDYVRYRKITSNMNERFPDATADELNLSDATCIICREEMT
TAKKLLCGHLFHVHCLRSWLERQHTCPTCRAPIIPPDNGRAASARQHGAQRGVQLAAGAG
TPGSGGAPSENVNMRQAKLEAAASAASLYGRSFAYPTNTLNRYSGPRHATSNASQSGEAS
TSNQSQTDQSVQWKHTGDALEPEPFISYGPVVPITSNGDLENSLQKAYENAIRSQIEILQ
IQLQMVQQGATTLATDNNNADRAPDPKNE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgatccggctgcagacctacgcggcgttcagcctgctggcgacgacgacggcggtgtac
tacgcgttcagcagccgggtgcagttctacccggcggtggtctacctctcgtcgtccaag
atctgcttcgtgctgctcctcaacacgggcctcgtcgccatgtgcgtcgcctggcagctc
gtcaagcgcgtcttcctgggcaagctccgcgaggccgaggtggagcggctcaacgagcag
tcgtggcgggaggtcgtggagatcctcttcgcggtcaccatcttccgccaggacttctcc
gttgccttcctcgccatggtcgccgccctgctcctcgtcaaggcgctgcattggctcgcg
cagaagagggtcgagtacattgagaccacgccctccgtgcccatgctgtcgcacttaagg
attgtgtccttcatggtgttcctgcttgctgttgactgcatattcctgtccaactcgttg
atgtcactgataaagaattgggaggcctctgttgcaatcttcttttcattcgagtatatg
atactagcaacatccacggtgtcgacattcatgaagtatgtattctatgtcagcgacatg
ctaatggaaggtcaatgggagaaaaaggcagtgtatacattttatttggagctcatcagt
gaccttgtgcacttgtctttatacatgctcttcttcatagctatcttcctgaactatggt
gtcccgctgcacttgatccgtgagctgtacgagaccttccgcaatttcaggattcgtgtt
tcagattatgtacgctacagaaagataacttccaacatgaatgaacgctttccagatgct
actgccgatgagctcaatttgagtgatgctacatgtattatttgccgcgaagagatgacc
acggcaaagaagctgctctgtgggcacttgttccatgtgcattgtttgagatcatggcta
gagcgccaacatacttgccccacatgtagagcaccaattatccccccggacaatggacgt
gctgcatcagcgcgacagcatggagctcaacggggagttcagcttgctgcaggcgctggt
actccaggttcgggaggagcaccaagtgagaacgtgaacatgcgccaagcaaaacttgag
gctgctgcttcagctgcttccttatatgggagatcttttgcttatccaacaaacacttta
aataggtattcgggacctcgtcatgctacatcaaatgcttcacaatcaggagaagcaagt
acttccaatcaatcccagacagaccaatcagtgcagtggaagcatactggggatgcttta
gaaccagagccttttatttcatatggccctgttgtcccaataacaagcaacggggacctt
gaaaattcactacaaaaggcgtacgagaatgctataaggagccagatagagatattgcaa
atccaattgcaaatggtgcagcaaggagctacgacattggcaactgacaacaacaatgct
gatcgagcacccgacccgaaaaatgagtga
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