Brachypodium distachyon (stiff brome): 100823297
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Entry
100823297 CDS
T01717
Name
(RefSeq) SEC12-like protein 1
KO
K14003
prolactin regulatory element-binding protein
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100823297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100823297
Membrane trafficking [BR:
bdi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
100823297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
EIF3I
WDR55
WD40_Prp19
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_EML
Beta-prop_CAF1B_HIR1
PROPPIN
Ge1_WD40
Phage_holin_2
Motif
Other DBs
NCBI-GeneID:
100823297
NCBI-ProteinID:
XP_003557449
UniProt:
I1H2Y3
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Position
1:complement(53571059..53576399)
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AA seq
393 aa
AA seq
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MAGGGGEGSVAAAGGGKVACAAWIRRREDRATRVFAAYGRASSPPALEVLGFDSERCSLS
EEPLARAVLGENPDDAPRSIAVHPTGDELVCATAKGCRLFKMIFEEFTVRLIPREAPPLA
SIGPQKCLVFSTDGAKIALGGEDGHLRIFHWPSMNMLLDEPKAHKSFRDMDISLDSEFLV
STSTDGTARIWKIDEGVPLVNLTRSSDEKIECCRFSRDGMKPFLFCTVAKGTKVVTVVWN
ISDWARIGYKRLLGKSISTLSVSMDGKFLALGSHDGDFCAVDVKKMEVSHWSKKVHLGSP
ISSIEFCPTERIVISTSPQWGSELTKLNVPADWKEWQVWLILLALFLGSAVLFYVFYQHS
GSFWNSPVGRHQPAKPWSVLKEAPPSPENQNLW
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcggcggcggcgagggctcggtcgcggcggcggggggcgggaaggtggcgtgc
gcggcgtggatccggcgccgggaggacagggccacccgcgtcttcgcggcgtacggccgg
gcatcgtcccctcccgccctggaggtcctcggcttcgactccgagcgctgctccctctcc
gaggaacccctggcgagggctgtgctcggggagaatccagacgacgcgccgcgcagcata
gcggtgcacccgaccggggacgagctcgtctgcgccacggccaaggggtgcaggctattt
aaaatgatttttgaagagttcacggttcgccttattccaagagaggctcccccgcttgca
tccattggaccacagaaatgtcttgttttcagcacagatggagctaaaattgcccttggt
ggtgaggatgggcatctcagaatatttcactggccaagcatgaacatgctcttagatgaa
cccaaagctcataagtcgttccgagatatggatatcagcttagactcagagtttttagtt
tcgacatccactgatggcactgcaagaatatggaagatagatgagggggtaccgttggtc
aatttgactcgatcttcggacgagaaaatcgagtgttgccgcttttctagggatggcatg
aaaccatttttgttctgcacagttgcaaaaggtaccaaagttgtgactgttgtttggaac
ataagtgactgggctcgaattggctacaaaagacttctcgggaagtctatctctacactt
tcagttagcatggatgggaagtttctggctttaggaagccatgatggcgacttttgtgct
gtggatgtaaagaagatggaggtttctcactggagcaagaaggttcatcttggttctccc
atttcctccattgaattttgtcctacagaaaggattgtaatctccacatcacctcaatgg
ggatcagagttgacaaaactgaatgtgcctgctgactggaaagaatggcaagtctggctt
atactcttagccctcttcctagggtcagccgtcctgttctatgtgttctaccagcactct
ggttccttctggaactccccagtggggcggcatcagcctgccaagccatggagtgtcctg
aaggaggctcctccatctcctgaaaaccagaacctctggtga
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integrated database retrieval system