| Entry |
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| Name |
(RefSeq) THO complex subunit 4B isoform X1
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| KO |
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| Organism |
bdi Brachypodium distachyon (stiff brome)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:bdi00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100823621
09122 Translation
03013 Nucleocytoplasmic transport
100823621
03015 mRNA surveillance pathway
100823621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:bdi03019]
100823621
03041 Spliceosome [BR:bdi03041]
100823621
Messenger RNA biogenesis [BR:bdi03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100823621
TREX complex
100823621
Spliceosome [BR:bdi03041]
Complex C
Other components
EJC/TREX
100823621
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100823621
|
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
4:31801464..31803358
|
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| AA seq |
211 aa
MAGSLDMSLDDLITKNKPHLRRGRARRNHEGRGGPTRSARRFHSRAAAAPYHHRQLNFHQ
QVQAPPAYGFVARPMAMVEEDAPTRLYISNLDYNVSNEDIKDLFSELGEVMRYSINYDKS
GRSKGTAEVVFSTRSAARAAVNKYNNVHLDGKPMKIEVVGTNIEAPAAPAIFAFAAPPAG
NFSFPPKSEICSGAGRGGGRGWPRRRGGRGH |
|---|
| NT seq |
636 nt +upstreamnt +downstreamnt
atggcgggctccctggacatgtccctcgacgatctcatcaccaagaacaagccccacctc
cggcgtggccgcgcccgccgcaaccatgaagggcgaggaggccccacgcgctcagcccgc
cgcttccactcccgtgccgccgccgcgccctaccaccaccgccagctcaacttccaccaa
caggtacaggcgccgccggcttacggattcgtcgcccggccgatggccatggtggaggag
gacgcccccaccaggctctacatctccaacctcgactacaacgtctccaatgaggacatc
aaggatctcttttcagagctgggtgaggtcatgcgctactccattaactacgacaagagt
ggaagatcaaagggaactgcagaggtggtgttttcaacaaggtcggctgctcgagctgct
gttaacaagtataacaatgtgcaccttgatggcaagcctatgaaaatcgaggtcgtcggg
acaaacattgaggcaccagcagcacctgccatctttgctttcgccgcaccacccgctgga
aacttcagtttccctcccaaaagtgaaatttgcagtggagctggaaggggcggcggccga
ggatggcctcgccgcagaggtgggcgcggccattag |
|---|
