Brachypodium distachyon (stiff brome): 100823641
Help
Entry
100823641 CDS
T01717
Name
(RefSeq) coatomer subunit beta'-1 isoform X1
KO
K17302
coatomer subunit beta'
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100823641
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bdi04147
]
100823641
Membrane trafficking [BR:
bdi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100823641
Exosome [BR:
bdi04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100823641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IFT140_1st
NBCH_WD40
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_WDR19_1st
Clathrin
TPR_GEMI5
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_DCAF12
TPR_1
TPR_8
Beta-prop_WDR35_TULP_N
TPR_2
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
100823641
NCBI-ProteinID:
XP_010228099
UniProt:
A0A0Q3HAF0
LinkDB
All DBs
Position
1:complement(49817441..49828121)
Genome browser
AA seq
911 aa
AA seq
DB search
MPLRLEIKRKFAQRSERVKSVDLHPTEPWILSSLYSGSVCIWDYQSQTMVKSFEVSELPV
RSAKFVSRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWDKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTTKIWSLGSPDPNFT
LDGHQKGVNCVDYFTGGDRPYLITGSDDSTAKVWDYQTKSCVQTLEGHTHNISAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAVGYMKGSRRMVIGYDEGTIMIKMG
REVPVASMDTSGKIIWAKHNEIQTVNIKTVGAGFEATDGERLPLAVKELGSCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSEGEYAIRESTSRIKIFNKSFQ
EKKTIRPTFSAERIFGGVLLAMCSSDFICFYDWADCRLIRRIDVTVKNVYWADGGDLVAI
ASDASFYILKYNRDVVAAYLEGGKPVDEEGVEDAFELLHEVNERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMYHLDRPMYLMGYLANQSRVYLIDKEFNVIGYTLLLSLIEYKTLVL
RGDLERANEILPSIPKTQYNSVAHFLESRGMLEEALEIATDADYKFDLAVQLGRLEVAKD
IAVEAQSESKWKQLGELAMSTGKLEAAEECLLQAKDLSGLLLLYSSLGDAIGIEKLASLA
KEHGKNNVAFLCLFMLGKLEDCIQLLVDSNRIPEAALMARSYLPSKVSEIVATWRNDLSK
VNPKAADSLADPSEYPNLFEDWQVALTVEKNIASQRGHYPSADEYLNYADKSDSTLVEAF
KRMQVIEDEEPVDEHDENGEPDEEVLEENKMEENTDEAVQVDSDEPEETVLVNGNEGEEQ
WGTNNEGTSPA
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcaggttggagatcaagaggaagtttgcacagcggtcggagagggtcaagtcg
gtggatctgcaccccacggaaccatggatcctgtcgagcttgtactcggggagcgtgtgc
atctgggattatcagtcacagaccatggtgaaatcatttgaagtttcagagttgccagtg
cggtcagcaaaatttgtatcaaggaaacaatgggttgtagccggtgcagatgatatgtac
attcgtgtctacaactacaacaccatggacaaagttaaagtttttgaggctcatactgat
tacatcagatgtgttgctgtccatccaactcttccatacgtgctgtcctcatctgatgac
atgttgataaagctgtgggactgggataaagggtggatgtgcactcaaatctttgagggg
cattcacactatgtcatgcaagttactttcaatccaaaggatactaacacttttgcaagt
gcatctcttgaccgcactacaaagatatggagtttgggttctccagatccgaattttacg
ctcgatggacatcaaaagggtgtgaattgtgttgactacttcactggtggtgacaggccc
tatttgattactggttctgatgactccactgcaaaggtctgggattaccaaaccaagagc
tgtgttcagacacttgaaggccatacacacaacatttctgctgtttgtttccatcctgag
cttcctataatcattactggatcagaagatgggacagttcgtatatggcattccacaact
tacagacttgagaacacactaaattatggccttgaacgagtctgggctgttggatacatg
aagggatcaagaagaatggtgattggttacgatgagggaactattatgataaaaatggga
cgcgaagtaccagtagcaagtatggataccagtgggaaaatcatttgggcaaagcataat
gagatacaaactgtgaatataaaaacagttggtgcaggctttgaggctacagatggggaa
aggttgcccctagccgtgaaggaattaggaagctgtgatctttacccacagagcttgaag
cataaccccaatggccgatttgttgttgtgtgtggagatggtgaatacataatctatact
gctcttgcttggaggaataggtcatttggatcagcgttagagtttgtttggtcatcagaa
ggagagtatgcaatcagagaaagtacatcaagaataaagattttcaataaatctttccag
gagaagaaaaccatccgtcctacattctcagcagagcgcatctttggtggtgtgctgttg
gcaatgtgttccagtgacttcatttgcttttatgactgggcagattgtagactcatacgc
cgaattgatgtgactgtcaagaacgtctactgggctgatggtggtgatctagttgcaata
gcaagtgatgcatcattctacatcctgaagtacaatagagatgttgttgctgcttatctt
gaaggtggtaagcctgtggatgaggaaggtgttgaagatgcttttgagctgcttcatgag
gtcaatgagcgagtgcggacagggatttgggttggagactgctttatttataacaattca
tcatggcgactaaattattgcgttggtggtgaggtcaccacgatgtatcacttggatcgc
cctatgtatttgatgggatatcttgcgaaccaaagtcgagtttatcttattgacaaggag
tttaatgtcattgggtacacattacttctcagtttgatagaatacaagacacttgtgttg
cgtggggatttggaacgtgcaaatgagattttaccgtccataccaaagacacagtataat
agtgttgctcatttcttggaatccagaggaatgttggaggaggcacttgagatagccact
gacgctgattataagtttgacttggctgtgcagcttggaagattagaagttgcgaaggat
attgctgtagaagcacaaagtgaatctaagtggaagcagttgggtgagcttgctatgtcc
acaggcaagcttgaagcagcggaagagtgccttctgcaggccaaggatttaagtggcttg
ttgctactatactcatctcttggagatgctatcggaatcgaaaaacttgcttctctagca
aaagagcacggaaaaaacaatgttgctttcctctgcctctttatgcttggtaaattggaa
gattgcatacaattgcttgtagacagcaatcgtatacctgaagctgcattaatggcacgt
tcttatcttcctagtaaagtttcagagattgtagcaacatggagaaatgacctcagtaaa
gttaatccaaaagctgcagattctttggcagatccttctgagtatccaaatttatttgaa
gactggcaggttgcacttactgttgaaaagaatattgcctcccagaggggacattatcct
tctgctgatgaatacttgaactatgctgacaagtcagacagcactcttgtggaagctttc
aaaaggatgcaagtcattgaagatgaggaacctgtagatgaacatgatgaaaatggagag
cctgatgaagaggtattggaagagaataaaatggaggagaacacggatgaagctgtccaa
gttgatagtgatgaacctgaagagactgttcttgtaaatggaaatgagggtgaggaacag
tggggtacgaacaatgaaggaacttcgccagcctaa
DBGET
integrated database retrieval system
