Brachypodium distachyon (stiff brome): 100823797
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Entry
100823797 CDS
T01717
Name
(RefSeq) probable ubiquitin receptor RAD23 isoform X2
KO
K10839
UV excision repair protein RAD23
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03420
Nucleotide excision repair
bdi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100823797
09124 Replication and repair
03420 Nucleotide excision repair
100823797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
bdi03051
]
100823797
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100823797
Proteasome [BR:
bdi03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
100823797
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
100823797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
Ubiquitin_4
Crinkler
Dsc3_N
UBA_3
Motif
Other DBs
NCBI-GeneID:
100823797
NCBI-ProteinID:
XP_003574508
UniProt:
I1I789
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Position
3:38549801..38554736
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AA seq
394 aa
AA seq
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MKVSIKTLKGSSFEIEVDPTSKVVDLKKLIENTQGQNVYPADQQMLIHQGNVLKNDTTLE
ENKVLENNFIVIMLSKKGSTSAASGTAKEPTKQPMVDRAAPVAPAMQLPAEQTPVTPVSA
PVPTALAVAPPAATAAAAAASTQADPYGQAASSLVAGSNLEGTVQSILEMGGGAWDRDTV
VHALRAAFNNPERAVEYLYTGVPEQEAPAPAQEPPALGQQGDPVQAPQSQQAVASSGPNA
NPLDLFPQVLPNASANAAGGNLDVLRNNSQFRGLLSLVQANPQILQPLLQELGKQNPQIL
QLIQENQAEFLRLINEPAEGAEGNLLEQFGAGVPQTVAVTPAENEAIQRLEHMGFDRDLV
LEVFFACNKDEQLAANYLLDHMNEFDDEAPEPPQ
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtctccatcaaaaccctcaagggctccagcttcgagattgaggtggatcccacc
agcaaggttgtcgatcttaaaaagctcattgaaaatacacaaggacagaatgtgtaccca
gctgatcaacagatgctcatccatcaagggaatgttcttaaaaatgacacaacactagaa
gagaacaaagttctggagaataatttcattgttataatgttgtctaagaagggatcaaca
agtgctgcttcaggtactgccaaggagcccacaaagcagcccatggttgaccgagcagca
cctgttgcccctgcaatgcaactacctgccgaacaaacacctgtcacgcctgtgagtgca
cctgttccaactgcactagctgttgcgccccctgctgctactgctgctgcggcagcggca
tccactcaagcagatccgtacggtcaagctgcgtcaagccttgttgcaggaagcaattta
gaaggaacagttcaatccattctggaaatgggtggaggagcatgggatcgggacactgtt
gtgcatgctctacgggcagcatttaacaacccggagcgggctgttgagtacttgtatact
ggggttcccgagcaagaggcccctgctccagctcaagaacctcctgcacttggccaacaa
ggcgatccagttcaggctccacaatctcagcaagcagttgcttcatctggacccaatgct
aatcccttggacctgtttcctcaggtccttccaaatgcttctgcaaatgctgctggtgga
aatcttgatgttctgcgaaacaattcacagttccgtggcctgctttctttagtccaggct
aatcctcaaattttacaacctttgcttcaagaactggggaaacaaaacccacagattttg
caactgattcaggaaaaccaggctgagttcctgcggctgataaatgaacctgcagaggga
gctgaagggaatttgctagaacagttcggtgcgggagtgcctcaaactgtagcagtcaca
cctgccgagaatgaagccatacagcggcttgaacacatgggcttcgatcgtgacctggtt
ctagaggttttctttgcgtgcaacaaggacgagcagctagcagcaaactatctcttggac
cacatgaatgagtttgatgatgaagccccggaaccgccacaataa
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