Brachypodium distachyon (stiff brome): 100823908
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Entry
100823908 CDS
T01717
Name
(RefSeq) KH domain-containing protein SPIN1 isoform X1
KO
K14945
protein quaking
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100823908
Spliceosome [BR:
bdi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100823908
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
KH_1
Motif
Other DBs
NCBI-GeneID:
100823908
NCBI-ProteinID:
XP_003557365
UniProt:
I1H2J6
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All DBs
Position
1:complement(52298725..52306333)
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AA seq
285 aa
AA seq
DB search
MSGLYSQGFSPARTASPQIRGNPDHDRLLCSQYLAELLAEHQKLGPFMQVLPVCSRLLNQ
EIMRVSSMAHDHGFSDFDRRRYRSPSPMSSPIMRPNLHGNGFGPWNGLHQERAGFPPPGT
SMDWQGAPPSPGSYIVKKIIRMEVPVDAYPNFNFVGRILGPRGNSLKRVEASSGCRVFIR
GKGSIKDTEKEEKLKGKPGYEHLNDPLHVLIEAELPANIIDARLKQAQEIMEELLRPVDE
SQDFYKRQQLRELAVLNSTLREDSPHPGSVSPFSNGGMKRAKPSQ
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggctctacagccagggtttctcccctgcgagaaccgcctcgccccagattagg
ggcaaccccgaccatgataggcttctttgcagtcagtacctggctgagcttcttgccgag
catcaaaagctggggccgtttatgcaggttctgccggtgtgtagccggctgttgaaccaa
gagatcatgcgggtatcaagcatggcccacgaccatggatttagtgattttgacaggcgg
cgttatagaagtcctagtcctatgtcttcaccaattatgcgtcctaacctgcatggcaac
ggatttggtccctggaatgggctacaccaagagagggcaggctttcctcctcctggaacg
agtatggattggcaaggagcacctccaagtcccggctcttatatcgtcaagaagatcata
cgcatggaggttccagttgatgcttaccccaatttcaatttcgttggacgcattctagga
ccaaggggtaattctctaaagcgggttgaagcatcaagtggctgccgtgttttcataaga
gggaagggttccattaaagatacagagaaggaggagaagctgaaagggaaacctggttat
gagcatctgaatgatccactgcatgtcttgattgaggctgagttaccagccaatataatt
gatgcaagattgaaacaggcacaagaaatcatggaagaactgctaaggccagtggatgaa
tcacaagatttctataaaaggcaacaactgagggaattggctgtgctaaattcaactctg
agagaggatagccctcatcccggaagtgtctccccattcagcaacggtggcatgaaacgt
gctaaaccaagccaatag
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