Brachypodium distachyon (stiff brome): 100824086
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Entry
100824086 CDS
T01717
Name
(RefSeq) DNA ligase 1 isoform X1
KO
K14545
ribosomal RNA-processing protein 7
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100824086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bdi03009
]
100824086
Ribosome biogenesis [BR:
bdi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100824086
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP7
Motif
Other DBs
NCBI-GeneID:
100824086
NCBI-ProteinID:
XP_003570453
UniProt:
I1IE96
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All DBs
Position
3:complement(55961022..55964936)
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AA seq
372 aa
AA seq
DB search
MGKSKDKKVSREAKVDKKLALGLGVKRKQLKKKKDRVLDGAVEREGVAERSVVKDKKLVG
SKKIVLKEKKKTKHVKVTSRHTKTNDLVSVNKDEATPKLKKKNKKQQLNESHSPVEVQTS
PLDSNDAGALKPKKKKKKVREGKGLVEPNDAEDILHENQEILAADVNQLAGETEVMDIGE
PENAKRGKKNKTKKVKRSGKVNRTDRHASTTENNLERNVEVDVADVDEIPSVNEDFSRGM
NKWILEYRQKRPGLKVLQQRIDEFITLHEEQQEKEKKEKEEAAAKDGWTVVVHHKGRKKT
TEAETGTAVGSVSLASMQEKFSKKKPKEVGQNFYRFQKREAQMTELAMLQSKFEQDKKRI
QQLRAQRKFKPY
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatccaaagacaagaaggtttcgcgggaagcgaaggttgataagaaattggcg
cttgggcttggagtgaagagaaagcagctgaagaagaagaaggacagagttttagatggc
gctgtcgaacgtgagggcgtcgctgaacgtagtgtcgtgaaagataaaaaattggttgga
agcaagaaaattgtactgaaggaaaagaagaaaactaagcatgtcaaagtaacaagccgt
cataccaagaccaacgatctggtatctgtcaataaggacgaggcaacacctaagctaaag
aagaagaacaagaaacagcaactaaatgaaagccacagtcctgttgaggtacaaactagt
ccgcttgacagtaatgatgctggagcacttaagccaaagaagaagaaaaagaaggtgagg
gaagggaagggcttggtggagcctaacgatgcagaagatatcctgcatgaaaatcaagaa
attcttgccgctgatgtcaaccaacttgcaggtgaaacggaagttatggatattggggag
cctgaaaatgcaaagaggggaaagaaaaataagacaaagaaagtgaagcgatctgggaaa
gtcaacaggacagataggcatgcatcaactacagagaacaatttggagaggaatgttgaa
gttgatgttgcagacgttgatgagattccatcagtgaatgaagacttttctaggggaatg
aataaatggatcttggagtacagacagaagcgaccaggcttgaaagttttgcagcaaagg
atagatgagtttataactttgcatgaggaacaacaagagaaggagaagaaggaaaaagag
gaagcagctgcaaaagatgggtggacagttgtggttcatcataagggtaggaaaaagacc
acagaggctgaaactggaacagcggttggctctgtatctctggcttcaatgcaagagaaa
ttttctaaaaagaaacctaaggaagttggtcaaaacttctataggtttcagaaacgagaa
gctcaaatgactgaactggcgatgctgcagagcaagtttgagcaggacaagaaaaggata
cagcagctacgggcccaaaggaaattcaagccgtactga
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