Brachypodium distachyon (stiff brome): 100824108
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Entry
100824108 CDS
T01717
Name
(RefSeq) serine/arginine-rich splicing factor SC35
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100824108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100824108
Spliceosome [BR:
bdi03041
]
Common components
Common spliceosomal components
SR proteins
100824108
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
HV_Gp350_C-term
YflT
Motif
Other DBs
NCBI-GeneID:
100824108
NCBI-ProteinID:
XP_010235245
UniProt:
I1I828
LinkDB
All DBs
Position
3:complement(41013776..41017411)
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AA seq
321 aa
AA seq
DB search
MSHFGRAGPPDIRDTFSLLVLNISFRTTADDLYPLFDRYGKVVDVFIPRDRRTGDSRGFA
FVRYKYADEAQKAVDRLDGRNVDGRNIMVQFAKYGPNAEPIRKGRVIEEVEKLHDRSRSR
SPRPRHKDDRRDRDHKRRSRSRSRERHGRDKERAHRRHSRSPSRSSSPDYKNRRRARDDD
KRRSKSRSRSRSYHSASPARRSVSPRKSPASRRSPAPHSRSPSPRKSPAPHSRNPSPRKR
SPAPHSRSPSPRKRSPAPHSRSPAPRKRSPTPHSRSPTPPKSPLDGSPKKQTNGKGSPPS
RSVSPSPRRSSSRSPGSDGKE
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttcgggagggcgggcccgccggacatccgcgacaccttctcgctcctcgtc
ctcaacattagcttccgaaccacggccgacgacctctacccgctcttcgaccgctacggc
aaggtcgtcgacgtcttcataccgagggatcggaggactggagactcgaggggtttcgcg
tttgtgcggtacaaatacgctgatgaggctcagaaggctgtagatcggcttgatggacgt
aatgtggatggcaggaacatcatggtgcagtttgccaagtatggccctaatgcggagcca
atccgtaaaggaagggtcatcgaggaggtcgagaaattgcacgacaggtcaagaagccgt
agccctaggccaaggcacaaagatgaccgcagagacagagatcataagaggcgcagtcga
agcaggagcagagaaaggcatgggcgtgacaaggagagagcacatcgccgtcacagtcga
agcccaagccgaagttcaagtcctgactataaaaaccgtcgtagagcaagggatgatgat
aagcgcaggagcaagagcaggagtcgaagccgctcataccatagtgcttcacctgctcgg
cgcagtgtcagccctcgcaagagcccagcatcacgcaggagccctgcaccacacagcagg
agcccatcaccccgcaagagccctgcaccacacagcaggaacccatcaccccgcaagagg
agccctgcaccacacagcaggagcccatcaccccgcaagaggagccctgcaccacacagc
aggagcccagcaccacgcaagaggagccctacaccacacagcaggagcccaacaccaccc
aagagccccttagatggaagtcccaaaaagcagacgaatggaaaaggttcacctccttca
cgcagtgtttcaccatcacctaggcgttctagctctcgtagcccaggcagtgatggcaag
gagtaa
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