Brachypodium distachyon (stiff brome): 100824168
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Entry
100824168 CDS
T01717
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3 isoform X2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100824168
Spliceosome [BR:
bdi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100824168
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Ortholog
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GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
100824168
NCBI-ProteinID:
XP_003564696
UniProt:
I1HTR7
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All DBs
Position
2:54314322..54318993
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AA seq
443 aa
AA seq
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MGDPSRVIHIRNVGHEISESDLLQVVQPFGTVAKLVMLRAKNQALVQMEDLAASVSAIQY
YTTIQPSVRGRNVYLQYSSHQELTTDQSSHGRNPDQDEPNRILLVTVHHMLYPMTVEVLH
QVFSPYGFVEKIVTFQKTAGFQALIQYQSRQSAIQACGALHGRNIYDGCCQLDIQYSNLS
ELQVHYNNDRSRDFTNPSLPTEQRQRSSQPGYNDPSVLFGFQQPGAAYAQMGQAAMVAAA
FGGTLPPGVTGTNDRCTLIVSNLNTELIDGDKLFNLFSIYGNIIRIKILRNKPDHALVQM
ADGLQAELAVHYLKGAMLLGQKLEVNFSKYPSITPAPDAHDYSNSNLNRFNSNVAKNYRH
CCAPTRIIHISALPQEISEDMILNHLGEHGTIVKSKLFEAGGKTQALVQFESEEEATEAL
VSKHASKLEGSTIRISFSQMQNI
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacccctccagggtgatccacatccggaacgtcggccatgagatctccgagagt
gatctgctccaggtggtgcagccgttcggcacggtcgctaagctcgttatgctgcgtgcc
aagaatcaggcccttgtccagatggaggatttggctgcttcggtaagcgccatccagtac
tacacaacgattcaacctagcgtaaggggaagaaatgtgtacttgcaatattcgtctcac
caagaactgactactgatcagagctctcatggacggaaccctgaccaggatgaacccaac
cgaattctcttagttaccgttcatcatatgctctatcctatgaccgtcgaagtgcttcat
caagtgttttctccttatgggtttgtggagaagattgtcacatttcaaaagacagctggt
tttcaagctctcatacagtatcagtcacgacaaagtgctatacaagcatgtggtgctttg
catggacggaacatttatgatggttgctgccaactagatattcagtattcaaacctcagt
gaattgcaagttcactacaacaatgatagatccagagatttcacaaatccatctttgccg
acagagcagcgtcaaagatcctctcagcctggttataatgatcctagtgtcctttttggt
ttccagcagcctggtgctgcatatgcacagatgggccaggctgcaatggttgctgctgca
tttggcggaacattgcctcctggggtgactggtaccaatgatcggtgcacactcatagtt
agcaacttgaacacagagcttattgatggggataagctcttcaatctattttctatttac
ggaaatataatacgaatcaagatactccgcaataagccagaccacgcccttgtccagatg
gctgatgggcttcaggccgagcttgctgtccactatttaaagggagctatgttacttgga
cagaagttggaagttaacttctcgaaatacccatctattacccctgctcctgatgcacat
gactactcaaactccaacctcaacagatttaacagcaatgtggctaagaactaccgccac
tgctgtgctccaaccaggattatccacatatcagcgctcccgcaagaaatatcggaggac
atgatccttaaccacttaggtgagcatggcactattgtcaagtcaaaactgtttgaggcg
ggtggcaaaacacaggcccttgtgcagtttgaaagtgaggaagaggcaaccgaagcgcta
gtctctaagcatgcaagcaagcttgaggggtctaccattaggatttcattctcgcagatg
cagaacatatag
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