Brachypodium distachyon (stiff brome): 100824409
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Entry
100824409 CDS
T01717
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER
KO
K21444
poly(rC)-binding protein 3/4
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100824409
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
100824409
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GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
MOEP19
Motif
Other DBs
NCBI-GeneID:
100824409
NCBI-ProteinID:
XP_003573848
UniProt:
I1HWQ7
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Position
3:1541768..1546494
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AA seq
470 aa
AA seq
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MATAAPEELAHHGAEEEEEEEDPEEVEPWLGSSDSEPEEHPPALEPWVPSPETEPEQHPP
VPAPTNSASTEEEGEFRPRWPGFPGASVFRLVVAGDKVGGLIGRRGETIRRLCEETRARV
RVLDPADGVAGQQIVLISATEETQAELAPAMDAAIKIFKHVNEIEGINASVTFSASAPEI
CSARLLVPKEQAAHLIGKQGIMIKSIQETTGSTIRIIDKDDLLNYRMVDERIVEILGASL
KALNALKSVLGLLRKFLVDHSVLHLFERKNQAIAHAQDISKENQVSNDYALPVSRDLLLS
DGQSPLSPKGNRYLSYGRDPSVCDPYSSQIRHPTESLIKKITQTMKIPLPQADEIIGVGG
RNIAHIRSVSGAIVVLEETGDYLNEVLVTIQGSSSQVHTAHQLVQVILLGDREAPPTRSS
YNNDLDTGIPGRLFAPDGVPASQDHPLLHHEYRPSSDGWGHSAYRGYRLV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgcggcgccggaggagctcgcccaccacggagccgaggaggaggaagaagag
gaggacccggaggaggtggagccgtggctcgggagctccgactcggagccggaggagcac
ccgccggcgctcgagccgtgggtcccatcccccgagacagagccggagcagcatccgccg
gtgcctgcaccgacgaattcggcgtccacggaggaagagggggagttcaggccgcggtgg
cctgggtttcccggcgcgagcgtgttccggctggtcgtggcgggggacaaggtgggcggc
ctcatagggcgccggggcgagaccatcaggcgcctctgcgaggagacccgcgcccgcgtc
cgcgtcctcgaccccgcggacggcgtcgccggccagcagatcgttttgatatctgcaaca
gaagaaacacaagcagagctggcacctgcaatggatgctgcaattaagatattcaaacat
gtaaatgagatagaagggatcaatgccagtgtcacattttccgcttctgcaccagagatt
tgttctgctagattattggttcctaaagaacaagctgcacacttaattggcaagcaagga
atcatgatcaagtcaattcaagaaactactggtagcaccataaggattatagataaagac
gaccttttgaattatcggatggtggatgaaagaattgtggagatacttggtgcttccctc
aaggccctcaatgccctaaaatcagtgcttggacttctccggaagttcttggttgatcat
agtgtacttcatctatttgaaagaaagaaccaagccatagctcatgcacaggatatttct
aaagaaaatcaggtttccaatgattatgctcttccagtgagccgggaccttttgctatct
gacggtcaaagtccacttagcccgaaaggcaacagatacctgtcgtatggacgagaccca
tctgtttgtgacccatattcatcacagatcagacatccaactgagtccttaataaaaaag
attacacagacaatgaagatcccattgccacaagctgatgagataattggtgtagggggg
cgaaacattgcacatatacgttctgttagtggagcaattgttgttcttgaggaaactgga
gattatctgaatgaggttcttgttactatccaagggagttcttcacaagttcatactgcg
catcaacttgtacaggttattctattgggcgacagagaagctccaccaaccaggagcagc
tataataacgaccttgacaccggcattccagggcggctcttcgctccagatggtgttcca
gcaagtcaagaccacccattgttgcaccacgaataccgaccatccagcgatggctgggga
cactctgcttaccgtggatacaggctggtatag
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