Brachypodium distachyon (stiff brome): 100824411
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Entry
100824411 CDS
T01717
Name
(RefSeq) nijmegen breakage syndrome 1 protein
KO
K10867
nibrin
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100824411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdi03032
]
100824411
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100824411
DNA replication proteins [BR:
bdi03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
100824411
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
100824411
BRCA1-C complex
100824411
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
Nbs1_C
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
100824411
NCBI-ProteinID:
XP_003574091
UniProt:
I1I4W8
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Position
3:31164973..31170063
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AA seq
580 aa
AA seq
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MVWALTPVNTASGLQKFYFCAAGTYKVGRKGCDILVPTDTSISRVHAEITIEKMVAWDPQ
SGAPATPSYVSVVDRSKYGTFVNKVQGTQGSRPRKDEEVMLADGDTVTCGTGNTTFRFSF
VPIVVFFHGKKSSRIDRSLQAIMTSIGAYVTRKWSDESTHVLVDESSLLTPELLDAIITK
KPIVLGNWFKAMAEKNVHTEIPSCTQYIPNLTLDGMEIKMVEIKLMENCLAGYTFILGSS
EKYKFGEKLQALLESIGATYLSVDEFCANSQESGAGENDQQILLVPAKSPVEFSEIRHLF
PLSKITDVKLFVAILSGRLEAAAIEPPAYIITSSNTTDETFVADSDVEIDTAISDHTVAA
SKSQHHIQQTCDDKTEGKLTTSDNAVNYGETKVNIDIPDDLEKDEISKSMEADVQVIEKT
TTPVFKAGCEDVQVINMPQGKKLENSMDKTCNAVFVNKAPKDEKLDPSTDETCHIIFSQD
LIVKRVRQTAHAMTTEAGGVNFKRFRKRETVSGNSFRALIPFAREPYRESDYESGTLTDF
MREEKRRKQMESIAEDLFNNQKSKKKASAGSSIQTLLTGR
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggtctgggcgctgacacccgtcaacacagcgagtgggttgcagaagttctacttctgc
gccgccgggacgtacaaggtcggtcgaaaaggttgtgatatccttgtaccaacggacaca
tcgatatcccgagtgcatgcagagatcacaattgaaaagatggttgcctgggatccacaa
tctggtgcgccagctaccccttcatatgttagtgttgttgaccgttcgaagtacggcaca
tttgtcaacaaggtacaagggacccagggaagtcggccacgtaaagatgaagaagtaatg
cttgccgatggggacactgtgacttgtggaactgggaatacgaccttcaggttttcattt
gtccccatagtggtcttctttcatggcaaaaaatcatcacggattgatcgatcattgcag
gcaattatgacatctattggtgcatacgttactcgtaagtggagtgatgaaagtacacat
gttcttgtggatgaatcatctctgttgacacctgagctccttgatgcaatcatcacaaag
aagccaatcgtcttgggaaactggttcaaggcgatggctgaaaagaacgtgcacactgaa
atcccttcttgtacacaatatattccaaacttgactcttgatgggatggagataaagatg
gttgagatcaagctcatggagaattgcctagcaggctatacttttatcctgggatcatcg
gaaaagtataaatttggagagaaactgcaagcgttactggaatcaattggagcaacatat
ctcagtgttgacgagttttgtgctaacagtcaggagtctggagctggagagaacgaccaa
caaattcttcttgttcctgcaaaatctccagtggaattcagtgagatacgtcatctgttt
cctttgtccaagatcactgacgtgaagctatttgttgctatattgtctggtcgcttggaa
gcagctgctattgaaccacctgcttacattattacatcctcaaatacgacagatgaaact
tttgtggcggattctgatgttgaaattgatactgcaatatctgatcatactgttgctgct
agcaagtctcagcatcatattcagcaaacctgtgatgataaaacggaaggcaaattgaca
accagtgataatgctgtaaattatggagaaacaaaggtcaatattgatattcctgacgac
ctggagaaagatgaaatttcaaaatccatggaggctgatgttcaggtcatagagaaaaca
acaactcctgtgttcaaagctgggtgtgaggatgttcaagttataaacatgccacagggt
aagaagttggaaaatagcatggataagacatgcaatgctgttttcgtaaacaaggcacca
aaggatgagaagttggatcctagcacggatgagacttgtcatattatttttagtcaagat
ctgattgtcaaaagggtacgtcagacagctcatgctatgacaacagaagctggaggcgtt
aactttaaacgctttagaaagagggaaactgtgtctggaaacagcttcagggcccttatc
ccatttgcacgagaaccatacagagaatctgattacgaaagtggcacattgacggatttc
atgcgagaggagaagcggcgaaaacaaatggaatccatcgcagaggacctcttcaacaat
cagaagtcaaagaaaaaggcgtctgcaggtagttcaattcagaccctactcactggtcgc
tga
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