Brachypodium distachyon (stiff brome): 100824448
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Entry
100824448 CDS
T01717
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase Pin1
KO
K09578
peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:
5.2.1.8
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100824448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100824448
03110 Chaperones and folding catalysts [BR:
bdi03110
]
100824448
Enzymes [BR:
bdi01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
100824448
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100824448
Chaperones and folding catalysts [BR:
bdi03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Parvulin
100824448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rotamase
Rotamase_3
Rotamase_2
Motif
Other DBs
NCBI-GeneID:
100824448
NCBI-ProteinID:
XP_003579437
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All DBs
Position
5:complement(26768922..26771278)
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AA seq
226 aa
AA seq
DB search
MPSVPKIGKGQPRGARLSSLKREPRNPNPRPKRPLRFRDRRDAKIGTESPAAAAAASGEG
DAGRKRPSGDDAPADSKRRRPEAASSGSRDRNHHRHHHQKPREGDGGKEKKEKLRASHIL
IKHEGSRRKASWRDPEGVAISATTRDDAADLARALREQIAAGELKFEVAATDNSDCNSAK
RGGDLGPFERGKMQKAFEKAVVALKVGEMSDVVDTDSGVHIILRTG
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgttcccaaaattggcaaaggtcagcccaggggggctcgtctgtctagcctg
aaacgggaaccaagaaatccaaacccccgaccgaagcgccccctccgcttccgagaccgc
cgcgacgccaagatagggaccgagagccccgccgccgcggccgccgcttccggcgagggc
gacgccggcaggaagcggcccagcggcgacgatgcgcccgccgacagcaagcgccgccgc
cccgaggccgcctcctccggctcccgcgatcgcaaccaccaccggcaccaccaccagaag
ccgcgcgaaggggacgggggaaaggagaagaaggagaagctgcgggcgtcgcacatcctg
atcaagcacgaggggtcccggcgcaaggcctcgtggcgggaccccgagggggtcgccatc
tccgccaccacccgcgacgacgccgcagacctcgcccgcgcgctccgggagcagatcgcc
gccggggagctcaagttcgaggtggccgccaccgacaactccgactgcaactctgccaag
cgcggcggtgacctcggtccattcgagaggggcaagatgcagaaggcgtttgagaaagca
gttgttgctctgaaagtgggggagatgagtgatgtggttgatactgacagtggggtgcat
atcatcttgaggactggctga
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