KEGG   Brachypodium distachyon (stiff brome): 100824555
Entry
100824555         CDS       T01717                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100824555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bdi03019]
    100824555
Messenger RNA biogenesis [BR:bdi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100824555
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     100824555
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 100824555
NCBI-ProteinID: XP_003579826
UniProt: I1IY34
LinkDB
Position
5:complement(14767010..14770784)
AA seq 128 aa
MSWAGPDEMLLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEL
YCDVPLGLYVIRGENVVLIGELDREKDELPSHMTCVSEADIRTAEKAEKEARDLKGTMRK
RMEFLDFD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggccgggcccgacgagatgctcctctccacctccctggctggcttcttagac
aagaaacttattgtcctactacgagatggacgaaagctacttggcacgctctgctcattt
gatcagtttgcaaatgttgttcttcagggtgcatgtgaacgagtaattgtaggagaatta
tattgtgatgttcctcttggtctgtatgtgatccggggagagaatgttgtattaattgga
gaattggatcgtgagaaggacgaactccctagtcacatgacttgcgtctcagaggctgat
ataagaacggctgagaaagcagaaaaggaagcaagagatctgaaaggcacgatgaggaag
aggatggagttcctagactttgattaa

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