Brachypodium distachyon (stiff brome): 100824603
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Entry
100824603 CDS
T01717
Name
(RefSeq) guanine nucleotide exchange factor subunit Rich
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100824603
Membrane trafficking [BR:
bdi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
100824603
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_EML_2
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
100824603
NCBI-ProteinID:
XP_010236164
UniProt:
I1IFL4
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All DBs
Position
3:58966233..58975336
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AA seq
1126 aa
AA seq
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MYMAYGWPQSIPLDPGDSDGGVVLLRVLGRLLLAVCPASLHLWSASQHKVRLARLDRSPD
SLAAHGHNARAVWSPDAKTIAVLTSSFYLHIYKVQLSGKPLIVGGKQLPGLCLASLSLII
VEKVPLGNDISITSNFACDSKSMLLGLSNGHLQVVSWNAEFLDSFKLCCSTCSSEKTTAV
VDALVFDPPSSRENSNARPAPCCTEDSAIFHVELSVKLRLLVALYSDCQIALCTVGKKGL
KQTSGIRVERWLNTGDAMCTSVASDQQILAVGCSRGVVELYDLAENARHIRTVSLYDWGY
SVEDTGPVTCISWTPDNCAFAVGWKFRGLTVWSVSGCRLMCTIRQAGSNSASSPMVKPNA
QKFEPLMGGTSHIQWGDYGYKLFAVEESLSERVLAFSFAKCCLNRGLSSTTYTRQILYGE
DRILLVQPDDTDELKMLHLNVPVSYSSQNWPVQHVVASDDGMYLAVAGSHGLVLYDLRNK
RWRFFGDVTQEQKIQCKGLLWLGKVVIVCNYVESSNTYELLFFPRYHLDHSSLLYRKPLL
GRPIVMDVFQDYILVTYSPFDVHIFHVMISGELSPTSSPVLQLSTVRELSIMSPKGPPVS
MRLIPEPTDEGELKRDTDGSSDLLSQQPSRCLILRVNGELSVLDMDDGHEQALTNSVELF
WVTCSQMEEKGNLIKEVSWLDYGHQGMQVWYPSHGANPFRQEDFLQLDPELEFDREVYPL
GLLPNVGVVVGVSQRMSFSTAEFPCFEPSPQAQTILHCLLRHLLQRDKHEEALRLANLSA
EKPHFSHCLEWLLFTVFDADISRPSTSKNQISPKSESPKRSLLEKTCDLLRNFSEYMDVV
VSVARKTDGRHWADLFSAAGRSTEMFEECFQRRWYRTAACYILVIAKLEGPAVSQYCALR
LLQATLDESLYELAGELVRFLLRSGRDFENANADSEKLSPRFMGYFLFRSPYKRQSSDLK
SNSTKELSPHIASVMNILESHASYLMSGKELSKLVAFVKGTQFDLVEYLQRERLGSARLE
NFASALELIGQKLQMDTLQSRLDAEFLLAHMCSVKFKEWIVVLATLLRRAEVLVDLFRHD
LRLWNAYSITLQSHDVFREYLDLLSALEDELSSVSNLTLQQNEQSS
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgtacatggcgtacgggtggccgcagtcgatcccgctggacccgggcgactccgacggt
ggcgtggtcctcctccgcgtcctcggccgcctcctcctcgccgtctgccccgcctcgctc
cacctctggtcggcgtcccagcacaaggtccgcctcgcccgcctcgaccgctccccggac
tccctcgccgcgcacggccacaacgcccgcgccgtctggagccccgacgctaagaccatc
gccgtcctgacctcttccttctacctccacatatacaaggtgcagctctcggggaagccg
ctgatcgtcgggggcaagcagctccctgggctttgcctcgccagtttgtccctaataatc
gtcgagaaggttcctctcggcaatgacatctcaataacgagcaattttgcatgcgacagc
aaaagcatgctcctcggactgtcaaatggccacttgcaggttgtgtcctggaatgctgag
ttcttggacagcttcaagctttgttgctccacatgttcatcagagaaaaccactgctgtt
gtagatgctttggtgtttgatccacctagttcgagagaaaattctaatgcaaggcctgct
ccctgctgcacagaggattcagctatcttccatgttgagttgtcggtgaagctaagactg
ctagttgccttgtactcagactgtcagattgcactatgtacggtcggtaagaagggatta
aagcaaactagtggcatcagagtagagagatggttgaacactggtgatgcaatgtgtact
tctgtggcttccgatcagcagattcttgctgttggctgcagtagaggtgttgttgaattg
tatgacctggctgagaatgcgcgacatatacgcacagtttctttgtatgattgggggtat
tcagtggaagataccggtcctgttacttgtatatcttggacgcctgacaattgtgctttt
gcagttggatggaaatttaggggacttactgtttggtctgtatctgggtgccggttaatg
tgcacaattcgtcaagccggatctaattctgcttcatctccaatggttaaacctaacgcc
caaaaatttgagcctctaatgggcgggacatcacacattcaatggggtgattatggatat
aaactgtttgcagttgaagaaagcttgtcagaaagggttcttgctttctcatttgccaaa
tgttgcctaaacagaggactttcaagcacgacatatactcgccagattctttatggcgaa
gatagaatcctattagtgcaacctgatgatactgatgaacttaagatgctgcaccttaat
gttccagtctcctatagttcacagaactggcctgttcagcatgtagttgcaagcgatgat
ggtatgtacttggcagttgctggctctcatggcctagtgctgtatgatttgcgcaataaa
aggtggcggttttttggggatgttactcaagagcaaaagattcaatgcaaaggcttgttg
tggctgggtaaagtagttatcgtatgcaactatgttgaatcatcaaacacgtacgagctt
ctgtttttcccaagatatcaccttgaccatagctccttactttatcgaaaaccactgctt
ggtagacccattgtcatggatgtctttcaggactacattcttgttacctacagtccattt
gatgtgcatatcttccatgtgatgatctcgggagaactgtcacctaccagtagtccagtt
ttacagctctcaacagttagagaactttcaatcatgagtccaaagggcccacctgtttca
atgcgattgattcctgaaccaactgacgaaggagagctgaagagggatactgatggatct
tctgatttgttatcccaacaaccttcaagatgtttgatcttgcgggtgaatggcgaactt
tctgtgctggacatggacgatggacatgaacaagcacttacgaattcagttgaactcttt
tgggtcacttgttctcaaatggaagagaagggtaatcttatcaaagaggtttcatggctt
gactatggccatcaagggatgcaggtatggtacccgtcacatggagcaaatccttttagg
caagaagattttctgcagttggatccggagcttgagtttgatcgtgaggtgtatcctctt
ggtcttcttccaaatgttggtgtggttgttggtgtttctcagcgaatgtccttttcaacc
gcagagttcccatgctttgagccttctcctcaagcacaaacaatattgcattgtttgcta
cggcatctccttcagagagacaaacatgaagaagctttacgtttggcaaacttgtcagca
gagaaacctcacttttctcactgtttagagtggcttctgtttacggtatttgatgcagat
atatctaggccaagtacttcaaaaaaccaaatttcaccaaaaagtgaatctccaaagaga
tcccttctagagaagacatgtgacctacttcggaatttttctgaatatatggatgttgta
gtcagtgttgctaggaaaactgatggtcgacactgggcagatcttttctctgcagctggg
cgatccacagagatgtttgaggaatgcttccaacggagatggtacaggactgctgcttgc
tacatactggtcattgctaagcttgaaggccctgctgtcagtcagtactgtgcactccgt
ttgcttcaagctacacttgatgaatctctgtatgagcttgctggggagttggtccgcttc
ttgctaaggtctggcagagactttgaaaatgccaatgcagactctgaaaagctctctcca
aggtttatgggttattttctattccgttcgccatataagagacagtcttctgatttgaaa
agcaactcaacgaaagaacttagcccacatattgcctctgttatgaacattctggagagc
catgccagctatttgatgtctggcaaggaactttcaaagcttgttgcttttgtcaaaggg
actcaatttgatcttgtggaatatcttcagcgagaaaggctgggatctgctcgactggag
aattttgcatctgcacttgaactaattggtcaaaagctccaaatggacacacttcagagt
cggcttgatgctgagttccttcttgctcatatgtgttctgtgaagtttaaggaatggatc
gtggtgctagcgactttattgaggcgtgcagaggttttggtggatctctttcgacatgat
ctgcggttgtggaatgcatacagcattactctacagtcacatgatgtattcagggagtac
cttgaccttcttagcgccttggaggacgagctttcgtctgtctccaatctgacactgcag
cagaacgagcaatcgtcgtga
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