Brachypodium distachyon (stiff brome): 100824664
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Entry
100824664 CDS
T01717
Name
(RefSeq) TBC1 domain family member 5 homolog B isoform X1
KO
K18469
TBC1 domain family member 5
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100824664
Membrane trafficking [BR:
bdi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100824664
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
100824664
NCBI-ProteinID:
XP_010240277
UniProt:
I1GVT7
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All DBs
Position
1:complement(27210092..27218271)
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AA seq
724 aa
AA seq
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MPEPPARPRFSGLRGARWRADLGVIPSSPAVPTNQLRRAAADSRRRYANLRRRLLIDPHH
SKDEEGAPDLVVENPLSQNPESTWGQYFKNAELEKMLNQDLSRLYPELGDFFQTITCQAM
LERILLVWSLRYPEFGYKQGMHELLAPLLYVLHVDVQHFKEVRVLHEELFDDDFDGQTFP
DRLKLHRSDRTNTFEGSAAKIRSLDDLDPDTRDLLLINDEYGAEGELGIILSEKFMEHDA
YCMFENLMNGLVNGAQGVVAITDFYSLSPAPESSTGLTPVREASSAIYHLLASVDSSLHS
HLVELGVEPQYFALRWLRVLFGREFSLDNLLFIWDEIFSSPNHPYCTDIKSPAEYQFKVL
CSPRGALILSMAVSMMLHLRSSLLGSEHATSCLVRLLNFPEDIDLTNLIEKAKLLQPFAL
ESNLPSSPLKGKNPLTPPNYWEETWKMLQMSGDKSSGGPVIRLKGRGLLRRSVSNTESDI
STTKDANLENSLTSTSQSIVDELHDTDTVPAKVVNSLPPMPIEHRNDRVGQGIAEISRSN
SNGVWEAGHGYYPTSSEIRDPLGATSGYLSRDSSTSLSCGTDYDHDTNHAEEPCFSHDEK
VVNEPDPPSVHKGRIDESRPRNGKIDEAAITNQTVGSVDYQQHTLCFDVGSSSSVADKEL
TGKLRSLGESMIENIQVIEVFFQPNLRLASADKSRENVPGSTEQAKALAALEELRRISNL
LRRI
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgccggagccaccggcgaggccgcgcttctccggcctccgcggcgcccggtggcgcgca
gatctcggcgtcatcccgtcctcccccgccgtccccaccaaccagctccgccgcgccgct
gccgactcccgtcgcagatatgcgaatctgcggcggcggctgttgatagacccccatcat
tccaaggatgaggaaggcgctccggaccttgtcgtggagaatccactgtcgcagaaccca
gaaagtacttggggtcaatatttcaagaatgcggaacttgagaaaatgctgaaccaagat
ctgtcccgactctatcctgaattgggagacttcttccaaacaatcacatgccaggccatg
cttgaacgtatactgttagtatggagccttaggtacccagagtttggatataaacaagga
atgcacgaactcttagctcctctgctctatgtccttcacgttgatgtgcagcacttcaaa
gaagtcagggtgcttcatgaggagctttttgatgacgattttgatggccaaaccttcccg
gataggttaaagctgcacaggagtgacaggacaaacacttttgagggtagtgcagctaaa
atcagaagtttggacgatcttgatcctgataccagggacctcctcttgataaatgacgaa
tatggagccgagggtgagctgggtattattttatctgaaaagtttatggagcatgatgcc
tattgtatgtttgagaatttgatgaacggtttggtgaatggtgcacaaggtgtggttgct
atcactgacttctattctctcagtcctgcaccagaatcaagcacaggtttgacacctgta
agggaagcatcatccgcgatatatcacttgcttgctagtgtggattcctctcttcacagt
catctcgtggagttgggagtagaacctcagtactttgcactacgatggcttcgggttcta
tttggtcgtgaattttcacttgacaatcttctgtttatttgggatgagatattttcttct
cctaaccatccatattgcacagacataaagagtccagcagagtatcagtttaaggtttta
tgttctccccgtggtgccctgattttgtcaatggcagtttcaatgatgcttcatctcaga
tcctccttgctaggaagtgaacatgcgacctcttgcctggtgagactgttaaattttcct
gaagatattgacttgacgaacctgattgagaaagccaaactattgcaaccgtttgctcta
gaatcaaatcttccttcatctcctctgaaaggaaaaaatcccttgactccacccaattat
tgggaagagacatggaagatgctccagatgtcaggagacaagagtagtggtggtccagtt
attaggctgaagggaaggggattgttacgaagaagtgtttctaacacggaatcagatatt
tctaccaccaaggatgctaatttggagaacagtttgacttcaactagtcagtctattgtt
gatgaacttcatgacaccgatacagttcctgctaaagtagtaaatagtttaccaccaatg
cctatagaacatcgaaatgatcgtgttggtcaaggtattgcagagatttctagaagtaac
tcaaacggtgtatgggaggcaggacatggttactacccaacttccagtgaaattagagat
cctcttggagcaactagtggatacctatcgagggacagcagcacatctttgtcgtgtggt
actgattatgaccatgataccaatcatgcggaagaaccatgtttttctcatgatgagaag
gtggttaacgagcctgatccaccctctgtgcataaaggtaggattgatgaatcccgtccg
agaaatggtaagattgatgaagcagcaatcacaaatcaaacagttggatcggtggattat
caacagcatacactatgttttgacgtaggctcgagttcaagtgtggctgataaagagttg
accggaaaactaaggtctcttggtgaatcaatgattgaaaacattcaggttattgaagtc
ttctttcagccaaatttacggttggcctcagcagacaaatcaagggaaaatgttcctgga
agcacagagcaagctaaagcgcttgcagctctcgaagagctcagaaggatcagtaatctt
ttacgtcgtatctaa
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