Brachypodium distachyon (stiff brome): 100824716
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Entry
100824716 CDS
T01717
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100824716
04121 Ubiquitin system [BR:
bdi04121
]
100824716
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100824716
Membrane trafficking [BR:
bdi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100824716
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100824716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_5
zf-ANAPC11
zf-RING_UBOX
Anti-TRAP
DUF5795
zf-C3HC4_3
Zn_ribbon_8
IBR_1
DUF7129
DNM3A_N
zf-RING_10
HypA
Motif
Other DBs
NCBI-GeneID:
100824716
NCBI-ProteinID:
XP_003574092
UniProt:
I1I4W9
LinkDB
All DBs
Position
3:complement(31170641..31175761)
Genome browser
AA seq
366 aa
AA seq
DB search
MSTPGAAYYASLARKQFFCYQCNRTVLIAASAAAAGELSCPECGGDFLEEVTVPAPTILP
FPFAFPPMMPTATAPSPPSRSSSSSSAAAPSSDLSNFLTSILDLQEGRRARSRSGSGAAS
AAGTATPENEPESFDPVTFFQNYIHSLMEGGANIQVLLDDASVSLAPGLGGRTGGASFGD
YFVGPGLEQLIEQLAENDPNRYGTPPAAKSALSTLPDVVVTDSMVAAAEGAECAVCKEDF
SPGEGAKQMPCKHIYHDYCIVPWLELHNSCPICRFELPTDDPDYEGNKTSNPQPAVGIAS
AAASGNSSAAEEGREETGETARVVERRFNVSLPWPFGGLGGQTPQQDGNNGDAGSSSQDG
GGSNKN
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccccaggcgccgcttactacgccagcctcgcgcgcaagcagttcttctgctac
caatgcaaccgcaccgtgctcatcgctgcctccgcggccgccgccggcgagctctcctgc
cccgagtgcggcggcgacttcctcgaggaggtcaccgtccccgcccccaccatcctcccc
ttccccttcgccttcccccctatgatgcccaccgccaccgccccctcccccccatcccga
tcctcctcgtcctcctccgccgcagccccctccagcgacctgtccaacttcctcaccagc
atcctcgacctccaggagggccgccgtgccaggtccaggagcgggagcggtgctgcctcc
gccgcgggcaccgcgacacccgagaacgagcccgagtccttcgacccggtcaccttcttc
cagaactacatccacagcctcatggagggcggcgccaacatccaggtcctcctcgacgat
gccagcgtcagcctcgcccccggcctaggcggccgtacaggtggggcgagcttcggggac
tacttcgtcggcccgggcctggagcaactcatcgagcaactggcggagaacgaccccaac
cgctacggcacccctccggccgccaaatcggccctctccacgcttcctgatgttgtcgtg
actgattctatggtcgcggcggcggagggcgctgagtgcgctgtctgcaaggaagatttc
tcacctggggagggggccaagcagatgccctgcaagcacatctaccacgactactgcata
gtaccctggttggagctccataactcgtgccccatctgccgcttcgagcttcccactgat
gatcctgattacgagggcaataagacctcgaacccacagccagctgttggcatcgcttcc
gcagctgcatctgggaactctagcgctgctgaggaaggaagggaggagacaggggagacg
gcgagggtagttgaaaggagattcaatgtgtcgctgccatggccgtttggtggattggga
gggcaaacaccgcagcaagatgggaacaatggggatgctggcagtagctcgcaggatgga
ggtggcagcaacaagaattga
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integrated database retrieval system
