Brachypodium distachyon (stiff brome): 100824722
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Entry
100824722 CDS
T01717
Name
(RefSeq) DNA mismatch repair protein PMS1 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03430
Mismatch repair
bdi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100824722
03460 Fanconi anemia pathway
100824722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100824722
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
100824722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
100824722
NCBI-ProteinID:
XP_003575262
UniProt:
I1IB41
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All DBs
Position
3:complement(48885400..48891426)
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AA seq
921 aa
AA seq
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MGGASPAIKPIGKSAVHRICSGQVIFDLSSAVKELVENSLDAGATTVEVNLKAYGEEWFK
VADNGSGISPSNFQALALKHHTSKISDFSDLNSVVTFGFRGEALSSLCALGKLTVETRTK
DESVGTHLEFEHSGVVISNRKIARQVGTTVTIEKLFSTLPVRGKEFSRNIRKEYGKVISL
LNAYALIAKGVRLLCTNTVGKNSKMVVLKTQGSSSLKDNIITVFGLNTFKCLEPFNVTIL
EGCQVEGFLSKPGPGSGRNSGDRQFFYVNGRPVDMPKVTKLVNELYKSSNSKQYPVAVLN
FCIPTTSYDVNVAPDKRKIFFSSEQTILLSLREAIENLYNPQQCSFSINLIEDPEKEVDP
AIDEPHESTDLIETGNVSSPRNDDDKDETDSDDQDLPQNQKASFSARRVAVGTASKDRSP
LPGDPATPVDRSWLSEFQHEQPKVFHAQVKKNPAGSYHDRTGLAAKSSPSTTVQSSLSNF
LSLNKRKHEDSCNLLSEAPVLRRGTCSGQVRRTSSETSTPTILISGTSGIPNVNSDQETS
PLRHHSPQSFLPKRTEVSPHHSEPPNIESHSTETPPLDPCSIPSTKSYVDQQNDQHNSNF
AAPDKYSEVEPINIPLPDACGHDNGTTVCSTSVSYPVMQFTVAELRRRRKYSFTVSHKKG
VYCSNKTARFYKAATLDNYVPNDDEGKSNYLAAATNELDRLFSKDNFGEMEVVGQFNLGF
IIGKLDQDLFIVDQHAADEKYNFESLSQSTTLNIQPLLHPLRLELSPEEEVIVSMNMTTI
RKNGFVLAEDLHASPGNHYLLKAVPFSKNITFGVQDMKELISMLTDSQGDCSIISSYKMD
KTDSVCPSRVRAMLASRACRMSTMIGDPLTKAEMKKILKNLTGLRSPWNCPHGRPTMRHL
ADLHTIKSQESNQSGVKKLIG
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgggaggagcctcgccggcgataaagcccatcggcaagtcggcggtgcaccggatttgc
tccggacaggtcatattcgacctttcctccgccgtcaaggagctcgtcgagaacagcctc
gacgccggcgccaccacggtcgaggtcaacctcaaggcctacggcgaggagtggttcaag
gtcgccgacaacggcagcggcatctcgcccagcaattttcaggctctcgctctgaagcac
cacacatccaagatatcggatttctccgatctgaactccgtggtcaccttcgggttcagg
ggagaggcgctaagttccctctgcgcattggggaagttgaccgttgaaacaagaactaaa
gatgaatcagtcggaacacatttggaattcgagcactcgggcgtggtgatcagtaatagg
aagattgcacggcaagtcgggaccactgtaaccatcgagaaattgttctccaccttgccg
gttcggggcaaggagtttagtaggaatattcgaaaggagtacgggaaagtgatctccttg
ctgaatgcttatgccttgattgccaaaggggtcagactactttgcacaaatactgtgggg
aagaattctaaaatggtggtgcttaaaactcaaggaagcagttcactgaaagacaatatc
attacggtctttggtctgaacaccttcaaatgcctggagcccttcaatgtgaccatcttg
gaaggttgccaggtagaaggttttctttccaagcctggacctggcagtggtcgcaactca
ggagatagacagttcttctatgtaaatggcagacctgtggacatgccaaaggtcaccaaa
ctcgttaatgaactgtacaaaagctcaaattccaagcagtatcctgtggctgtcctaaat
ttctgtattccaaccacatcttatgatgtgaatgtggcacctgataagagaaaaattttc
ttctcatctgagcaaaccattttgctatctttaagggaagctattgaaaatctttacaat
cctcaacagtgtagtttctccatcaatctcattgaagatcctgaaaaggaagtggaccct
gccattgatgaacctcatgaaagcacagatttaatagaaactgggaatgtttcatctcct
agaaatgatgatgacaaggatgaaacagacagcgatgatcaggatttaccgcagaatcag
aaagcgtctttttcagcaagaagggtagctgttggaactgcatccaaagacaggagcccc
ttgccaggggacccagccactccggttgatagatcttggctttccgaattccagcatgaa
cagccaaaagtattccatgctcaagtaaaaaaaaacccagcgggatcatatcatgataga
acagggcttgctgctaaatcctccccttcaactactgttcaatcttctctttcgaacttt
ctgtcactaaacaagaggaagcatgaagacagttgcaatcttctttctgaagctccagtg
ctgagaagggggacatgctcaggacaagtgagaagaacaagttcagaaacaagcacacct
actatattaatatcgggtacatctggtattccaaatgtgaactcagatcaggaaactagt
cctttgcggcatcattctccacaatcttttttacctaagaggacagaagtttcaccacat
cattctgaaccacctaatattgagtctcatagtactgagacacctccccttgatccatgc
agtattcctagtacaaaatcttatgtggatcaacagaatgaccaacacaattcaaatttt
gctgcccctgataaatattcagaggttgaacctatcaatattcctttacctgatgcttgt
ggtcatgataatggtactacagtatgttctacatcagtatcttatccagttatgcaattt
acggttgctgagcttaggagaagaagaaaatacagttttacggtctcacataaaaaagga
gtctattgctccaataaaactgcaaggttttataaagctgcaacactggataattatgta
ccaaatgatgacgagggaaaatcaaattatttagccgcagccacaaatgagctggacagg
cttttcagcaaagataattttggagaaatggaggttgttggccagtttaatcttggtttc
atcattggaaagctggaccaagacctgtttattgtagatcagcatgctgctgatgagaag
tacaactttgagagcctatcacagtcaacaacattaaacatacaacctcttcttcaccca
ctgagacttgaactttcaccagaggaagaagttattgtttcgatgaacatgaccaccatt
aggaaaaatggctttgttttagcagaagatttgcatgcttcccctggcaatcattatctt
ttgaaagctgtgcccttcagtaaaaatattacatttggtgttcaagacatgaaggagcta
atctccatgctcactgacagtcaaggcgactgttcaataattagtagctacaaaatggat
aaaactgattctgtctgcccttcgagggttcgtgctatgttggcttcgagggcttgccga
atgtccaccatgattggtgatccactgacaaaagctgaaatgaagaagattcttaaaaat
ctaacagggctgaggtccccttggaattgcccacatgggaggccaaccatgcgccatcta
gcagatctgcatactataaaatcccaagaatcaaatcaaagtggtgtcaagaagttaatt
gggtga
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