Brachypodium distachyon (stiff brome): 100824783
Help
Entry
100824783 CDS
T01717
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
100824783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
100824783
NCBI-ProteinID:
XP_003564364
UniProt:
I1HSC2
LinkDB
All DBs
Position
2:51316998..51319513
Genome browser
AA seq
615 aa
AA seq
DB search
MPEAPSAQPAPASGYAPGAHREALEFIEHVTANAGKVQRRVLAEILAQNAPAEYLRRYGV
SCSLDAVDSFRRCVPLVTYEDLQPDILRIANGDTSPILSGKPISEFLTSSGTSGGERKLM
PTIADELDRRSLLYSLLMPVMSQSVPGLDKGKAMYLLFVKAESRTPGGLAARPVLTSYYR
SRQFLDRPHDPYTAYTSPNEAILCVDSYQSMYAQLLCGLVHRTDVLRVGAVFASGLLRAI
RFLEKHWPRLCHDIRTGELDPEITDRPVRDAVGRILRGAANRPALADEIEAECLKPSWEG
IVRRLWPRTKYIDVIVTGAMSQYIPTLEFYGGGLPLTCTMYASSECYFGLNLNPMCKPSD
VAYTLIPTMCYFEFLPVHRGSNTNAKPSHQDLVDLVDVKLGHYYELVVTTFSGLCRYRVG
DVLRVAGFKNEAPMFSFVRRQNVALSIDSDKTDETELHTAVSSAVQHLAPFGATLVEYTS
YADTAAIPGHYVLFWELRAGSTAVPASVFEECCLSVEEALNSVYRQGRASDRSIGPLEIR
VVSEGTFDKLMDYALSRGASINQYKAPRCVRPGPVVELLDDRVQAKYFSPKCPKWSPGNK
QWNNSNELASNGSGA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgccggaagcaccgagcgcccagccagctcccgccagcggctatgcccccggggcgcac
cgcgaggcgctcgagttcatcgagcacgtgacggcgaacgcggggaaggtccagcggcgc
gtcctcgccgagatcctggcgcagaacgcgccggcagagtacctgcgccggtacggcgtc
tcctgctccctggatgccgtagactccttccgccgctgtgtcccgctcgtcacctacgag
gacctccagccagacatactccggatcgccaacggtgacacctcgcctatcctctccggc
aagcccatctccgagttcctcacaagctcgggcacgtcaggaggggagaggaagctgatg
ccgaccatcgcggacgagcttgacaggcggtcgctgctgtacagtctgctgatgccggtg
atgagtcagtcggtgcccgggctcgacaaaggcaaggccatgtacctgctgttcgtgaag
gcggagtcgcgcaccccgggcgggctggcggcgcggccggtgctaacgagctactacagg
agccgacagttcctggaccggccgcacgacccttacacggcgtacacgagccccaacgag
gccatcctgtgcgtggactcgtaccagagcatgtacgcccagctgctgtgcggcctggtg
caccgcaccgacgtgctgcgcgtgggcgcggtcttcgcctccggcctcctccgcgccatc
cgcttcctcgagaagcactggccgcgcctgtgccacgacatccgcacgggcgagctcgac
ccggagatcaccgaccgcccggtgcgcgacgcggtcgggagaattctccgcggcgccgcg
aaccggccggccctggccgacgagatcgaggccgagtgcctgaagccgtcgtgggagggc
atcgtccggcgcctgtggccgcgcaccaagtacatcgacgtgatcgtgaccggcgccatg
tcgcagtacatcccgacgctggagttctacggcggcggcctgcctctcacctgcaccatg
tacgcctcttccgagtgctacttcggcctcaacctgaaccccatgtgcaagcccagcgac
gtcgcctacactctcatccccaccatgtgctacttcgagttcctccccgtccatcgcggc
agcaacaccaatgccaagccgagccaccaggacctcgtcgatctcgtcgatgtgaaactc
ggtcactactacgagctcgtcgtaaccaccttctcaggtttgtgccggtaccgcgtgggc
gacgtgctgagggtggcagggttcaagaacgaggcgccaatgttcagcttcgtgcggcgg
cagaacgtggcgctgagcatcgactcggacaagacggacgagacggagctgcacacggcg
gtgagcagcgcggtgcagcacctggcgccattcggtgcgacgctggtggagtacaccagc
tacgcggacacggccgccatcccgggccattacgtgctcttctgggagctccgcgccggc
agcacggcggtgccggcctccgtgttcgaggagtgctgcctgtccgtggaggaggcgctc
aacagcgtgtaccggcagggccgcgcctccgacaggtccatcggccccctggagatacgc
gtcgtctcggaaggcaccttcgacaagctcatggactacgcgctcagccgcggcgcgtcc
atcaaccagtacaaggcgccacggtgcgtgcgccccggtccggtcgtcgagctgctcgac
gaccgggttcaggccaagtacttcagccccaagtgccccaagtggagccccgggaacaag
caatggaacaactccaacgagctggcgagcaacggatcaggcgcctag
DBGET
integrated database retrieval system
