Brachypodium distachyon (stiff brome): 100824848
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Entry
100824848 CDS
T01717
Name
(RefSeq) protein NEDD1 isoform X1
KO
K16547
protein NEDD1
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bdi03036
]
100824848
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bdi04812
]
100824848
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
100824848
Microtubules and associated factors
gamma-tubulin ring complex
100824848
Cytoskeleton proteins [BR:
bdi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
100824848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML
WD40_RFWD3
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_IFT122_1st
PROPPIN
PAN2_N
Beta-prop_DCAF4
Shugoshin_N
WD40_like
GBR_NSP5
Motif
Other DBs
NCBI-GeneID:
100824848
NCBI-ProteinID:
XP_003577913
UniProt:
I1INZ7
LinkDB
All DBs
Position
4:complement(31843319..31851464)
Genome browser
AA seq
775 aa
AA seq
DB search
MGFVDPAAPLLATCGGDTVKLFDVTVESGDPCVLAYAPAPGNPVNAVKWNHTNLIIASAG
DDKKISLWHKKGKNVGQLPTSTIDRGDDIEESIYSISFSNKGSRYLCSGGSGHIVRIWDL
QRKRCIKWLSGHTDTITGVMYNCKDEHLASISMKGDLILHNLASGARAAELSDPNGQVLR
VLDYSRNSRHILATAGDDGSVHLWDTTARTPKVSWLKQHSAPTSGVCISPSSDKIIATVG
LDKKLYTLDSGSRRVTHTIPHEAPFSSLAYNDDGTILAAGTNSGRVVFYDVRGKPQPLTI
LRAYNSSEAVASLCWQRSKPVIVNENSSSEVALLGGTSEDSILMPDPLPSATPSTLTSGA
GIPSLRSSLTANTSGFLSTSDLSTTEETPYRTRPLSGGPLSKLQAPRGNFSIKDDMDVFS
PLVDVQPFTPSSNSWWDEHGSDETKKDDKHGDKKLSATRKFPYMEGNNEPHPMADWRSIS
NSRQDDASSVSTTPLPSWKSEPSISSPETSTGNALPDRVPHRQQISRFGQSAFQTGSLAF
GGLHDSGSTTSLSLKGSLTSNILMNLQNKGVLSNAHSPLETSSASLQSSISSSFMSKTLA
SVSSDLPGAAQSSSSWKPSTFTDKLSTCSVFSEGLASAFGSPKSKKTGAETKDELISGLL
SRQEAATASSSGSLLATNGVVPPQFPTSGLSADQQGASSFSLQYVQRMLEESLGSVHKSI
HEDVRNLHIELLRQFHMQEMETSGVMNLVLEKLEGLTKEVQQLRRENQQLRHQLL
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgggattcgtggatccggcggcgccgctgctcgcgacgtgtggtggcgacacggtgaag
ctcttcgacgtcacggttgagtccggcgacccctgcgtcctcgcctacgcccctgcgccc
gggaaccctgtcaacgccgtcaagtggaaccacaccaacctaatcatagcaagtgctgga
gatgacaaaaagatatcattgtggcataaaaagggtaaaaatgtaggacagctgccaaca
tcaactattgatcgtggggatgacattgaggaatccatatattccatcagttttagcaac
aaaggttctcgatatctttgctctggtggcagtggccacattgttaggatatgggatttg
cagcggaagaggtgtatcaaatggctaagtggtcacactgacaccattactggtgtgatg
tataactgcaaagatgaacatttggcatcaatcagcatgaagggtgatctgattcttcat
aatctcgcttctggagcacgtgctgctgaacttagtgatccaaatggacaggttcttaga
gtgcttgattattcacgtaatagtaggcatatattggcgacggcaggagatgatggttcc
gtacatctttgggatacaactgcgaggactccaaaggtctcatggctgaagcagcattct
gcacctacaagtggtgtttgtatttcaccctccagtgacaagataatcgctacagttggc
ctggacaagaagttatacacactcgattctggttcaagaagagtaacacacaccattcct
catgaggcccctttctcgtcattggcatacaacgatgatggcaccatattggcagcagga
acaaatagtgggcgtgtggtgttctatgatgttcgggggaaacctcagccattgacaatt
ctgcgggcatacaatagctcagaggctgtggcaagtttatgctggcaacggtcaaagccc
gtcattgttaatgagaacagttcttctgaagttgctcttttgggaggaaccagtgaagat
tctatccttatgccagaccctttgccttcagcaacaccttcaacattaacttctggagca
ggcattccgagtcttcgctcttctttgacagcaaacacaagtggatttctttctacttca
gacttgtctaccacggaggagactccatataggactcgtccattgtctggcggaccatta
tcaaagctacaggctcctcgtggtaacttcagtataaaggatgatatggatgttttttct
ccacttgttgatgttcagcctttcacaccatccagcaacagctggtgggatgaacatggg
agtgatgaaacaaaaaaagatgacaagcatggagataagaagttgtcagcaacaaggaaa
ttcccatatatggaagggaacaatgagccacatccaatggcagattggagatctatttcc
aattcaagacaggatgacgcctcatctgtgagtacaacacctttgccatcatggaagagt
gaaccatcgatctcttcaccagaaacatcgactggaaatgcactgcctgatagggtgcca
caccgtcaacaaatttcacgctttgggcaatcagcctttcagactggtagcttggcattt
ggaggtttacatgattcaggttcaacaaccagtctctcattgaaaggttctctaacaagc
aacattttaatgaacctacaaaacaagggcgtattgagcaatgcacattctcccctagag
acatcatctgctagccttcagagttcaatttcctcgtcctttatgtcgaagactctggca
tcagtgagttctgatttgccaggagcagcacaatccagttcctcatggaaaccctcaacc
tttacagataaactgagcacatgctctgtttttagtgaaggattagcttcagcattcggt
tcaccaaaatcaaagaagacgggagcagaaacaaaagatgaactaatcagtggtctttta
tcaagacaagaggcagcaactgcctcttcatctggaagccttcttgcgaccaatggggtg
gtgccaccacagttcccaacctcaggtttgtcagctgatcaacagggagcttcttctttc
tcccttcaatatgttcagcgcatgcttgaggaatctctagggtctgttcacaagtccatc
catgaggatgtgagaaatctccacattgaacttctcagacagtttcacatgcaggagatg
gaaacatctggcgttatgaacttggtcttggagaagctggaaggcctgacaaaggaagtg
cagcaactgagaagggagaaccagcagctccggcatcagcttctctaa
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