Brachypodium distachyon (stiff brome): 100824977
Help
Entry
100824977 CDS
T01717
Name
(RefSeq) paired amphipathic helix protein Sin3-like 5 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bdi03036
]
100824977
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
100824977
REST complex
100824977
Heterochromatin formation proteins
Other heterochromatin formation proteins
100824977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
Sin3_corepress
PAH
Motif
Other DBs
NCBI-GeneID:
100824977
NCBI-ProteinID:
XP_010230963
UniProt:
A0A0Q3QSY2
LinkDB
All DBs
Position
2:13164801..13170002
Genome browser
AA seq
826 aa
AA seq
DB search
MASSADEAASDGGDVRSERGKKSYMAETRQCLVLARQSLPRDVYDEFVKTMTEIWKRSVD
PDGEIRNISVESYKETVMELFQGQPEVMQGFIYFTQGHSPFKDNAIRMENPLDFIQRLKR
NPDITNEEYAAIIKTLLAYRKQGGTMTVADVFHNVKKCLSNCPELLDEFIKVYLPPRPNV
ALPDEESCRNLKPGRVGEAISSITPDAYHNLDSILMEDDDSEEGYEEPPCAEEGEEDKVE
PLPDWIPSREKEFPPKADITNCKRYTRSYYLLPDNCITLQSSYQTELGRSIFNDCLVCST
SGSERSDGSKCKTKNESSAGCEESDSCKPKIENKFESTISACEEEMFESDMLLHWFSETA
DFISNLQQHVDRDLKINEHLSPLHRKCIQKLYNDDYDHYCLLESKNTSAALAVLLSRLNQ
KVEDLSEARLCLHKTRSQVIAKNYYKSLDHHGPSFKILDTKRMSQKALLVEAKEINKTRL
NVADEYANPVMHEDISSIISSACASDEKQMMTWTKLVHPFLSANCQWPDYLKETVAHKEA
CEDCGIKKDFLGSIPNDSPAHKLSLTPKSGGKNSIDCSSSHDVFDAEIEEGEFIPAKEPT
SSDVSASVGDGLSFRCLATDTSRPSTCDHGNEPESQHESRQHSRRTAKSRGVKGGACCSL
MVLCRLYQILYERLQTARNLCTSDLYEEFKEKLCRLLDHSIDNCNFEDFCLKFLGPKSFE
LFTLDKVIKRVTKQLCILSSSDQDNSLLQFLEKLRRPIQPKILPQHQSSPTQQSNGLLKH
DREEQEKASIDDTGKLTSRHFQRRKKRKLENCPGSCSQLGIKDSNS
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtccgctgatgaggcggcctccgacggtggcgacgttcgatccgaaaggggg
aagaagtcgtacatggcagagactcgacagtgcttggtacttgctaggcagagcctgcct
cgtgacgtgtacgacgagtttgtcaagaccatgactgagatttggaaaaggagtgtcgat
cctgacggtgaaatcaggaatatctccgtcgaaagctacaaagagacggtcatggagcta
ttccagggccagcctgaagtcatgcagggcttcatctactttacacaaggccatagcccc
ttcaaggacaatgctatccggatggaaaatccattagatttcattcagagactgaagaga
aaccctgacatcactaacgaggagtatgccgctattatcaagaccttgctagcatacaga
aagcaaggagggaccatgaccgttgcagatgttttccataatgtgaagaaatgcttgagt
aactgtcccgagttactagatgagtttataaaagtttatctgccacctcgcccaaatgtt
gctctgccagatgaggagtcctgcagaaatctgaagcctggtcgagtgggcgaggccatt
tcaagcattactccagatgcttatcacaacttggatagtatccttatggaagatgatgat
agcgaagaaggttatgaagaaccgccttgtgccgaagagggcgaggaagacaaggttgag
cccttgccagactggattccctcaagagaaaaggaatttcccccaaaggcagacatcact
aactgcaaacgttacactcgtagctattacctgctaccagataattgtataactcttcaa
tcaagctaccagaccgaactgggaaggtctattttcaatgattgtttggtttgtagcaca
tctgggagtgagcgatcagatggctctaagtgcaaaactaaaaatgaatcatctgctggg
tgtgaggaatcggatagctgtaagcccaaaattgaaaataaatttgaatcaacaatttcg
gcatgtgaagaggaaatgtttgagagtgacatgctgttgcattggtttagtgagactgct
gactttatttcaaatctccaacagcatgttgacagagatttgaagattaatgaacatcta
tctcctctacaccggaagtgcattcaaaaactatataatgatgattacgatcattattgt
ttgttggagagtaagaacactagtgctgctcttgctgttctactttctcgtttaaatcag
aaggttgaagatttgtcggaggcacgtttatgtttgcataagacacgctcacaggttatt
gccaaaaattactacaaatcgctagatcatcatggcccctctttcaaaatattggataca
aagaggatgagccaaaaagctttgctggttgaagccaaagaaatcaataaaacgaggttg
aatgttgcagatgaatatgctaatcctgtgatgcatgaggacataagcagtatcatttcc
tctgcatgcgcttctgatgagaagcagatgatgacttggacaaaactagtacatccattt
ctttcggctaattgtcaatggccagactacttgaaggaaactgtagctcacaaagaggct
tgtgaagattgtggtatcaaaaaagatttccttggtagcattcccaatgattcacctgct
cacaagctttctttaactcccaagagtggtgggaaaaactccatcgattgtagttcttcg
catgatgtttttgatgcggagatcgaggagggtgagttcatacccgctaaagaaccaaca
agtagtgatgtttctgcatctgttggagatggattgagctttcgatgtctggcaactgat
acttcccgacctagtacttgtgaccacgggaatgagcctgaatcgcagcatgaatcaagg
cagcactccagaagaacagctaaatcgcgtggtgtgaaaggaggtgcttgttgttctctc
atggtgctctgcaggctttaccagattttatacgagagactacaaactgcgagaaattta
tgtaccagcgatctatatgaagaatttaaggagaaactctgcagactgcttgatcactct
attgacaattgcaattttgaagacttctgtctgaaatttcttgggccaaagtccttcgaa
cttttcactctggataaagtgataaagcgagtcaccaagcagctttgcatactttcttca
agtgatcaagacaactcgcttcttcagttccttgagaaattaagaagaccaattcaaccc
aaaatattgccgcaacatcaaagttcaccaacccagcaatcaaatgggctgctgaagcat
gatcgggaggagcaagagaaagcttccattgatgatactggaaaactgacgtcacgccat
tttcagagaaggaaaaaacgcaagttggagaactgcccagggagttgctctcagcttgga
ataaaggattcaaactcgtag
DBGET
integrated database retrieval system
