Brachypodium distachyon (stiff brome): 100824985
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Entry
100824985 CDS
T01717
Name
(RefSeq) vesicle transport v-SNARE 13
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100824985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100824985
Membrane trafficking [BR:
bdi04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
100824985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Prominin
DUF3792
Flagellar_rod
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
100824985
NCBI-ProteinID:
XP_003567991
UniProt:
I1HH11
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All DBs
Position
2:16111868..16115632
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AA seq
221 aa
AA seq
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MSEVFEGYERQYSEISASLSRKCAAASALDAEKKKQKLSEIQSDVQEAESLIRKMDLEAR
SLQPSVKAGLLAKLREYKSDLNNIKSEIKRISAANAQQATREELLEAGMSDTLAASSDQR
GRLMMTSERLNQSTDRIRESQRTVFETEEIGVSILQDLHNQRQSLLHAHTTLHGVDDYIG
KSKKILASMSKRMDRNKWIVGGIIAALVLAILFILYFKFAR
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggtgttcgagggttacgagcggcagtacagcgagatctcggcctccctctcg
cgcaaatgcgccgccgcctccgccctcgatgccgagaagaagaagcagaaactgtccgag
atccagtccgacgtgcaggaagctgaatcgctgatcaggaagatggatttggaggcgcgg
agcctgcagccgagcgtgaaggcagggttgctggctaaattaagggagtacaagtcagat
ctgaacaatatcaagagtgagatcaaaaggatctcggcggctaatgcccaacaggctacc
cgggaggagctcctcgaggccggcatgtctgacacacttgcggcgtcatctgatcagaga
ggaagactgatgatgacatcagaaagattgaaccagtctacagacagaattagagagagc
cagagaacagtattcgagacagaagaaataggtgtgtcaattcttcaggaccttcacaat
caacgacagtcactgctgcatgctcacacaacattgcatggtgtggatgactacattggg
aaaagcaaaaagatcctggcatcgatgtccaagaggatggacaggaacaagtggatcgtc
ggcggcatcattgcagcgcttgttctcgccatcctcttcatattgtacttcaagttcgct
cgctag
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