Brachypodium distachyon (stiff brome): 100825002
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Entry
100825002 CDS
T01717
Name
(RefSeq) protein TSS isoform X1
KO
K03255
protein TIF31
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
bdi03012
]
100825002
Translation factors [BR:
bdi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100825002
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_10
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
CLU
TPR_9
TPR_MalT
TPR_8
PAM2
Motif
Other DBs
NCBI-GeneID:
100825002
NCBI-ProteinID:
XP_003570287
UniProt:
I1IDE0
LinkDB
All DBs
Position
3:complement(54266649..54276933)
Genome browser
AA seq
1762 aa
AA seq
DB search
MAPKAGKAKPKAKGDKKKKEEKVLPTVLDVTVETPDYTHLTLKGISTDRILDVRKLLAVH
VDTCHLTSFSLFHEVRGAQLKDTVEIASLKPCHLSIVEEEYTEELAVAHVRRLLDVVACT
TAFGVKKPEQKPATDAAAAAVAEADKVANPGSPAGGGGEEPMYPPPKLGEFYDFFSFSHL
SPPLHYIRRSTRPFVDDKREDDFFQIDVRVCNGKPVTIVASRAGFYPSGKRALISHSLVG
LLQQTNRGFEGAYKALMKAFVEHNKFGNLPYGFRSNTWVVPPVVADLPSVFPPLPTEDET
WGGNGGGQGRDGKHDHRPWAKEFAILAAMPCKTAEERQVRDRKAFLLHSLFVDVGVLKAI
AVIQQMVPNSHEQTNSTTSPVLQTQQIGDMKITVTKDKADASSKLDVKLDGSQAPGISFD
DLAKRNLLKGITADESATVQDTATLGVVIVKHCGYTAVVQVPLDTQLTTVVPAQQDIHIE
DQPEGGSNALNVNSLRMLLQKSCAQSSGVQRLQSSDPEESGTTANFVRKIMTDSLQKLED
EAPRETRPIRWELGACWVQHLQNQSSEKTDAKKSDETKDVPTVKGLGKQFGQLKEIKKKT
DDKSGKSTSAKESTLPTNDAHTDNAASTEDKGAILQRLLSKAAFERLRESETGLHAKSPD
ELIEMAHKYYDDTALPKLVADFGSLELSPVDGRTLTDFMHTRGLQMRSLGQVVELSDKLP
HIQSLCIHEMVVRACKHIIRAVIAAVDDINDMAEAVASCLNILLGPSPEENNDGKCVEDH
NLRQKWLEVFLVKRFGSVWKDEYCLDLRKYAILRGLCHKVGLELVTKDYEMDTVPHPFRK
SDIISIIPIYKHVACSSADGRTLLESSKTFLDKGKLEDAVSYGTKALAKLVAVCGPYHRM
TAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHT
ELALKYVNRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHEALKCNQRLL
GVDHIQTAASYHAIAIALSLMEAYSLSVQHEKTTLRILQAKLGSEDLRTQDAAAWLEYFE
SKALEQQEAARNGTPKPDASIASRGHLSVSDLLDYINPDDELKVKEMQKKQARAKIKGRT
GQNQSEIADDEDQRSPPPKNDHSLTVKENSEVKENGTFAHHVKVEQKNEVPSNTVIDMPQ
NDFTEECRSDEGWQEAVPKGRSTGNRKPGANVRRPNLAKINTNLLSNSENGRYKGRASSS
FSSPRVSPNETAASSPLAKKLAKSSSFNSKAGNLAISSNSGENSPNPNPMTASLPTTQAA
AKVILSAAPIVSQTVRKSLSYKEVAIAAPGTLIKALNEEKDTTDPGTNLESSRAPKESNG
RPSEEKNGAIQASPEDNISEVATGEPKSSKSDNEQTNILVVSNEDEKASDSADISIEKNQ
PLATQAEANGTNEEAPTLTEANGSSSNDDEIDPGEDTQEQLSSGGENEKSSPSGSEKNDS
PEGAKETTSKLSAAAAPFSPSTVPAFGSMAVPSFREHGGLLPSPANVPPMLSIPLRKHPH
QSATARVPYGPRLAGGFNRSGHRVPRSKPVLPSGEVLPELSTSPKVMNPHAAEFVPGQSR
SPNGHSVSPNDGSIQASPHERPSSPDNIVESPMTASPQVSESSQTSPDGKDTPSGIDVET
GSENQNKEEMNKNNQVESEDGEVEPDQTVASESTEDDATALKGAQEDPAAPKDAQDDSSF
TEKPKSWADYSDGEAEAVQVAS
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaaggcggggaaggccaagcccaaggccaagggcgacaagaagaagaaggaa
gagaaagttctgcccaccgtgctggacgtcaccgtggagacgccggactacacacacctc
acgctcaagggcatatcgacggacaggatcctcgacgtccggaagctcctggccgtccat
gtggacacctgccacctcaccagcttctccctgttccacgaggtccgtggggcccagctc
aaggacacggtggaaatcgcgtccctgaagccctgccacctcagcatcgtcgaagaggag
tacacggaggagctcgccgtcgcgcacgtccggcggctcctcgatgtcgtcgcgtgcacc
accgctttcggggtcaagaaacccgagcagaagcccgccaccgatgcggccgctgccgcg
gtcgccgaagccgacaaggtcgccaatcctgggtcgcccgccggcggcggcggcgaggag
cccatgtacccgccgccgaagctgggggagttctacgacttcttctccttctctcacctc
tctccgcctctgcattacattaggaggtcgacgcgcccattcgtcgacgacaagagagag
gacgacttcttccagatcgatgtgagagtttgtaacgggaagccggtaacgattgtggca
tcccgagctggattctatccatcagggaagcgagcactcatcagccactccctcgttggg
ttgttgcagcagacgaaccgtggatttgagggggcttacaaggctctaatgaaggctttt
gttgagcacaacaagtttggaaatcttccttatggattccggtcaaacacttgggtcgtt
ccccccgttgttgctgatttgccatcggtgttcccacctcttccaactgaagatgaaact
tggggtggcaatggtggtggtcagggaagagatggaaaacatgaccatagaccatgggcg
aaagaatttgccatccttgccgcaatgccttgtaaaacagctgaggagaggcaagtccga
gacagaaaggctttcctactccatagtttgtttgtagatgttggcgtccttaaagctatt
gcagttatccagcaaatggtccccaattcacatgaacaaacgaattccacaacaagtcca
gttttgcagacacaacaaattggggatatgaaaataactgtgacaaaggacaaagcggat
gcaagttctaagttagatgttaagttagatgggagtcaggctccaggaatatcttttgat
gacctggctaagaggaacttattgaagggcatcactgctgatgagagtgctacagtgcag
gatactgctactcttggtgtggttattgtgaagcattgtggatatacagctgttgtccaa
gttccacttgacactcaattgacaactgttgttccggcacagcaggacattcacatcgaa
gaccaacctgagggaggtagcaatgctctgaatgttaacagcttaaggatgctgcttcag
aaatcatgtgctcagtcatcaggagttcagcgattgcagagttctgatcctgaagagagt
gggactactgcaaattttgtccggaaaataatgacagatagtctgcagaagcttgaagat
gaggctccaagagaaacaagaccaatcagatgggagcttggtgcatgctgggtacaacac
ctacagaatcaaagctctgagaagaccgatgctaagaaaagtgatgagactaaggatgtt
cctacagtaaagggcctgggaaaacaatttggtcagctgaaggagatcaagaagaagaca
gatgacaagagtgggaagagtacatccgcaaaagaaagtactttaccaacaaatgatgca
catacagacaacgctgccagcacagaggataaaggggctattcttcaaagattgctatca
aaagctgcttttgaaagactaagagaatctgaaactggacttcatgctaagtcccctgat
gaattgattgagatggcacacaaatattatgatgatactgccctgccaaaattggtagca
gactttggctcactcgagctttcccctgttgatggaaggacattaacagattttatgcac
actaggggccttcaaatgcgctcactgggacaagtggtcgagctttctgataagctccca
catatacagtcactgtgtatacacgagatggtagttcgagcatgtaagcacataattcgg
gctgttattgcagctgttgatgatataaatgacatggctgaagcggttgcgtcatgttta
aatatcttgctgggaccatctccagaagaaaataatgatggcaagtgtgtagaggatcat
aatctcaggcagaagtggttggaggtttttctagtaaagagatttggttccgtgtggaaa
gatgaatattgccttgatctaagaaagtatgccattctccgtggtctctgccataaggta
ggacttgagctagttaccaaagactatgaaatggatactgtgccacatccattcagaaag
tcagatatcatcagtattattcctatctacaagcatgttgcatgctcttcagcggatggt
cgcaccctgttggaatcatccaagactttcctggacaaaggaaaacttgaggatgcagtt
agttacggcacaaaggctcttgcaaaactggttgctgtttgtggtccttatcacagaatg
accgcaggagcttacagccttttggcagtagtgctttatcatactggtgacttcaaccag
gcaactatctatcaacagaaggctttggatatcaatgagagggaacttggacttgatcac
ccagatactatgaaaagttatggagatcttgctgttttctactatcgcttacaacatacg
gagttggctctaaagtatgtaaatcgagccctatatcttttgcatctgacatgtggcccg
tctcaccctaatactgctgcaacttacatcaatgtggcaatgatggaagaagggttgggt
aatgttcatgtcgcactccgttacctgcatgaggcgcttaaatgcaaccagcgtttgctt
ggtgttgatcacatacagacggctgctagttatcatgctatcgctattgctttgtcttta
atggaagcatactctttgagtgtccaacatgaaaaaaccactctacgaatacttcaagca
aagcttggatcagaagatcttcgaacacaggatgctgctgcttggctggaatactttgag
tccaaggcactagagcagcaggaagcagcacgcaacggtactccaaagcctgatgcttca
atagcaagcagaggccatctgagtgtatcagatcttctagattatatcaatccagatgat
gagctcaaggttaaggaaatgcaaaagaaacaagcccgtgctaagatcaaaggtcgtact
gggcagaaccaatctgaaatagccgatgatgaagatcaaaggagccctccacctaaaaat
gatcattcattaactgtgaaggaaaactcagaagtcaaagagaatggaacctttgctcat
catgtgaaagtggagcagaaaaacgaagtaccaagtaacactgtgattgacatgcctcaa
aatgattttactgaagagtgcagatctgatgaggggtggcaagaagctgttccaaaggga
agatccacagggaaccgcaaacctggtgcaaatgtgaggaggccaaatctggcaaagatc
aatacaaatttgttaagcaatagtgagaatggaagatacaaaggcagggcttcatccagc
ttctcttcccctcgagtttcacctaatgagactgcagcttctagccctcttgcgaagaaa
ttggcgaagagttcaagcttcaattccaaggcaggcaacctagcaatctcatcaaacagt
ggggagaattctcccaatcctaaccccatgacagcaagcctacccaccacacaagcagct
gccaaggtaatattgtctgcagcaccaattgtgagtcaaacagtaaggaagtcactgtca
tacaaggaagtggcaatagctgcaccaggaactcttatcaaagcattgaatgaggaaaaa
gatacaactgatccaggtaccaatcttgaaagttcgagagctccaaaagaaagcaatggt
cgcccttctgaagagaaaaatggagcaatccaagcgtcaccagaggataatatttcagaa
gtagcaacaggtgaaccgaaatcttccaagtctgataatgagcaaaccaatattttggta
gtatcaaatgaagatgagaaggcctcagattcagcagatatatctatagagaagaaccaa
ccattagcaactcaagctgaggccaatggaacaaatgaagaagcaccaacgctgactgag
gcaaatggttcttcatccaacgacgatgaaatagatccaggagaggatactcaagaacag
ctgtctagtggaggcgaaaatgagaaatcttcaccatctggaagtgaaaagaatgattca
ccagaaggtgccaaagagacaaccagtaagctttctgctgccgctgctccattcagtcca
tccactgtgccagcttttggttcgatggccgtaccaagtttcagggaacatggaggacta
ctgccatcaccagccaatgtgcccccaatgttatcaatccctctccgtaagcaccctcac
caatcagcaactgcaagggtcccttatggtccacgtctagctggaggcttcaacagatca
ggacaccgggtgcctcgtagcaaacctgtcttgccaagtggtgaagttcttccagagtta
agcacatcccctaaagtgatgaatcctcatgcagcagagtttgtcccaggtcaatctcgg
agtcctaatggccattcagtatctccaaacgatggtagtattcaagcatcaccacatgag
cgtccatcctctccagataatattgttgaatcacccatgactgcatccccacaagtttct
gaaagtagccagaccagtcctgatggaaaagatacacctagtggaattgatgttgaaact
ggtagtgaaaaccagaacaaggaggagatgaacaagaacaaccaagtggagagtgaagac
ggtgaagtggagcctgaccaaaccgtagcttctgaaagcacagaagatgacgcaaccgca
ctgaaaggtgctcaagaggacccagcagctccgaaagatgctcaagatgattcgagcttc
actgaaaagccgaagtcctgggctgattacagcgatggagaagctgaggctgttcaggtt
gcgagttga
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