Brachypodium distachyon (stiff brome): 100825035
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Entry
100825035 CDS
T01717
Name
(RefSeq) 25.3 kDa vesicle transport protein
KO
K08517
vesicle transport protein SEC22
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04130
SNARE interactions in vesicular transport
bdi04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100825035
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100825035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100825035
Membrane trafficking [BR:
bdi04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
100825035
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
100825035
NCBI-ProteinID:
XP_003557880
UniProt:
I1GME9
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All DBs
Position
1:4102289..4106020
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AA seq
218 aa
AA seq
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MVKLTMIARVTDGLPLAEGLDDGRDQKDSDFYKQQAKLLFKNLSNGHHEASRMSIETGPY
FFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETAARPYAFIKFDTFI
QKTKKLYLDTRTQRNLAKLNDELYEVHQIMTRNVKEVLGVGEKLDQVSEMSSRLTSDTRI
YADKAKDLNRQAFIRKYAPVAIVIGVVIMLFWAKNKIW
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctgacaatgatagcgcgcgtcactgatggccttccgctggcagaagggctg
gatgacggccgggatcagaaggattctgacttctacaagcagcaagctaaacttcttttt
aagaatttgtcaaatgggcatcatgaagcctcaaggatgtcgattgagaccgggccttac
tttttccattacatcattgaaggtcgagtatgttatctaacaatgtgtgaccgttcttat
ccaaagaaacttgcattccaatacctagaagatctgaagaatgaatttgagagagttaat
ggcagtcaaattgaaactgctgcaaggccttatgcttttattaagtttgacacattcata
cagaagactaagaaactgtatttggatactagaacccaaaggaaccttgcaaaattgaat
gatgagctctatgaggtgcaccaaattatgactcgcaatgttaaagaagttcttggtgtc
ggcgaaaagctagatcaggtcagtgaaatgtcaagtaggttgacatccgacacaagaatc
tatgcagataaagcaaaggatctcaatcgccaggccttcattcggaagtatgctcctgtt
gccattgttattggggttgtaataatgctcttttgggccaagaacaagatatggtga
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