Brachypodium distachyon (stiff brome): 100825171
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Entry
100825171 CDS
T01717
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
100825171
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bdi04040
]
100825171
Ion channels [BR:
bdi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
100825171
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
100825171
NCBI-ProteinID:
XP_003580666
UniProt:
I1J2H2
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Position
5:25711434..25717358
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AA seq
718 aa
AA seq
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MDRYRDKFKRLDEASPRSSVPSEVGGGSSLRFSMPRFGYASFNPLKSFMSGMRKGSGGLK
SLRQSITSGAPKTAFAEDLKSFNKNIFDPQEKFLLRMNRFFFSSCILAVAVDPLFFFLPI
INNRVNNSNCIGIDKKLAVTSTVLRTIIDSVYLIRVFLQFRTAYVAPSSRVFGSGELVID
PVLIAMRYMKSYFIMDFFALLPLPQIVVWRYLRISDGPDVLSTKNALVWVVLCQYIPRLL
RIFPVTKDLKRTAGVFIETAWAGAGYYLLWFMLAGHNVGTLWYFLTIEREDSCWRFSCHR
ENGCDTSYLYCSENHGVSNSYNSWSISSQVFNQCDGTNDDYFNFGIYKQALVSQILEPGN
IISKICYCFWWGLQNLSTLGQGFTTSTYPGEVLFSIAICILGLILFALLIGNMQTYLQSV
AIRLEEMRVKKRDAEQWMHHRALPPQIRERVRRYERYRWLETRGVDEENLVQTLPKDLRR
DIKRHLCLGLVKRVPLFENMDERLLDAICERLRPALYTENEYILREGDPVDEMQFILHGC
LESVTTDGGRSGFFNKVQLKEGDFCGDELLTWALDPKSAANFPASSRTVKALSEVEAFAL
CAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWGACFIQAAWRRYCKRKMAEQRRREEE
AANRQSSSGGPSLGATIYASRFAANALRGVHRLRSKTVPAIVRLPKPPEPDFGIDDAD
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggacagatacagagataagtttaagaggctggatgaggcaagccctaggtcatctgtg
ccttctgaagtgggagggggaagcagcctgaggttcagcatgcctaggtttggttatgcc
tcgtttaacccactaaaatctttcatgtcagggatgagaaagggttctggaggactcaaa
tcacttagacaatcaattacatctggtgctccaaagacagcttttgcggaagatcttaaa
tcttttaacaagaatatattcgatccccaggaaaagtttcttctgcgaatgaatagattt
ttcttctcgtcgtgtattcttgctgttgcagtggatccgttattcttcttcctacccatc
atcaacaatagagtcaacaattcaaattgcatcggtatagataagaaattggcagtgaca
tcaacagtgctacggactattattgattctgtctatcttattcgtgtgtttcttcaattc
cgcactgcttatgttgctccatcttctcgagtgtttggaagtggcgagcttgttattgat
ccagtgctaattgcgatgcggtacatgaaaagttactttataatggacttctttgcattg
ctaccacttccacagattgttgtttggagatatcttcgcatttctgatggtccagatgta
ctgtctacaaaaaatgcactggtttgggttgtcttgtgtcaatacattccaaggttgcta
aggatattccctgtgaccaaagatctgaaaaggacagctggtgtatttattgaaactgcc
tgggctggtgctggttactatcttctctggtttatgctggctggtcataatgttggtact
ctgtggtacttcttaaccatagagcgcgaagatagttgctggcgtttcagctgtcatcga
gaaaatggatgcgataccagctacttgtattgtagtgaaaaccatggtgtcagtaatagc
tataacagttggagtattagttcccaagtatttaatcagtgcgatggtaccaatgatgat
tatttcaactttggtatctataagcaagccttggtctctcaaatacttgaaccaggaaat
attatctctaaaatttgttattgcttctggtggggattacagaatctaagtacccttggt
caagggtttacaacaagcacatatcctggagaggtgttattctctattgcaatatgcatc
cttggactgatcctttttgcgctcctcattggtaacatgcagacctaccttcaatcagtt
gctatacgccttgaagagatgagagttaagaagcgtgacgctgagcagtggatgcatcac
cgtgcactgcccccacaaatcagagaacgggtaaggcggtatgaacggtataggtggttg
gagaccagaggagtagatgaagaaaatttggttcagacccttcccaaagaccttaggagg
gacatcaaacgccatctctgtttgggtttagtgaaaagggttcctttgtttgagaatatg
gatgaaagattgcttgatgcaatatgcgagcgattaagacctgcactctacactgaaaac
gaatacattttgagggaaggtgatccagtggacgagatgcaatttattctccatggctgc
ttggagagtgtgaccaccgatgggggccgaagtggattcttcaacaaggtccagctaaag
gagggtgatttctgtggcgatgagttgctcacttgggcactggatcccaagtctgctgct
aatttcccagcttcttccaggactgtgaaagctctttctgaggtcgaggcattcgccctg
tgtgctgaggagctgaaatttgtggccagtcagttcaggaggctgcacagcaggcaggtt
cagcacacattccggttctactcccagcaatggaggacttggggagcctgcttcatccaa
gcagcttggcgccgctactgcaagcggaagatggctgagcagcgccgcagggaggaagag
gctgcgaaccgccagagcagcagcggcggccctagccttggagcaaccatctatgcgtct
cgcttcgcagccaacgcgctccggggagtccacaggcttcggagcaagactgttcctgcc
attgtgaggttgccaaagcctcctgaaccagattttggtatcgatgacgctgactaa
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