Brachypodium distachyon (stiff brome): 100825259
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Entry
100825259 CDS
T01717
Name
(RefSeq) starch synthase 3, chloroplastic/amyloplastic
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00500
Starch and sucrose metabolism
bdi01100
Metabolic pathways
bdi01110
Biosynthesis of secondary metabolites
Module
bdi_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
100825259
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bdi01003
]
100825259
Enzymes [BR:
bdi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
100825259
Glycosyltransferases [BR:
bdi01003
]
Polysaccharide
Storage polysaccharide
100825259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Glyco_trans_1_4
Glycos_transf_1
Glyco_trans_4_4
Motif
Other DBs
NCBI-GeneID:
100825259
NCBI-ProteinID:
XP_003580583
UniProt:
I1J204
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All DBs
Position
5:complement(24882032..24890365)
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AA seq
1285 aa
AA seq
DB search
MEMALRAQSPLCSRSRPVLVVRPANAAAALAQPIVKCSRFTRSRLVRCMVASSDYPKRNP
RRSSTPKPKGTASRGYAPRPAAESSTKKIEQSSTDEGDLARSNVMLGSAGIEQTGTAEES
SEVDLSGNVPSSEALEGVNETENEEEIDQKLPPALSSTSMDAESISEAADQTSTVEEASE
VDFSGNVSSSTALEGVNEAEAEEKVDQKQTSALASTSMDVESIDRELEEYRGKISALVAS
NPGPSSLASNQGQDKPIFGVHEQDKSVINFHEQGISIVDVSKQSQLAVGVTEEDPTKQTT
IIGEQDIAEEAVEDIDSKFFEDGQLALSEDDAGTSKYAQEEPSVAGDQLRISEDGHDEPE
IQELVQKDVNLQVLKRRLEELANENYSIGYKCFVFPEIVKADSVIDLYLNRSITALASES
TILIKGAFNGWRWNLFTEKMHRSELAGDWWCCKLHIPKQAYRLDFVFFNGDTVYENNNYN
DFFIEIESDMDEHSFEDFLVHEKQRELERLAAEEAERERQAEEERRKEEERAIMEAYRAQ
AKAEVETMKNRLQHVLGSASRHMDNLWYIEPSTYKGGDRVRLYYNRNLRPLMHSNEIWLH
GGYNNWTDALSIAERLVKSHEKDGDWWYANVTLPKSALVLDWVFADGPPGNARNYDNNGK
RDFHAVVSKSISEDFFWVEEEHRIFKRFQRERKEREDADRRKAEITAKMKAEMKEKTMRE
FLLSQKHIVYTEPLEVRAGTTVDVLYNPSNTVLNGSPEVWFRCSFNRWTHPSGPLPPQKM
VNAENGSHLQATVRVPLDAYMMDFVFSESEEGGTYDNRNGMDYHIPVSDSMAKEPPMHIV
HIAVEMAPIAKVGGLGDVVTSLSRAIQDLGHKVEVIIPKYDCLNLSNVKDLHCCQSFTWS
GTEIKVWFGKVEDISVYFLEPQNGMFWVGCVYGRNDESRFGFFCHSALEFLLQSGSSPDI
IHCHDWSSAPVAWLYKQQYVHNGLPNGRVVFTIHNLEFGANQIGKAMAHCDKATTVSYTY
SREVSRHGSIAPHYFKFHGIRNGIDSDIWDPYNDNFIPVHYTSDNVVEGKSSAKKALQEK
LGLHQTDSPVVGIISRLTAQKGIHLIKHAIYRTLERNGQVVLLGSAPDHRIQSDFTNLAR
KLHGEFDGRVKLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPIVRKTG
GLYDTVFDVDDDKERAREQGLEPNGFSFEGADINGVDYALDRAITTWYDARDWFHSLCKR
VMEQDWSWNRPALDYMELYHSARKN
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggagatggctctccgggcgcagagcccgctctgctcccggagccggccggtgctcgtc
gtgcggccggccaacgccgccgctgccctcgcgcagcctattgtgaagtgcagcagattt
acaagaagcaggcttgttcgatgcatggtagcaagttcagattatcctaagaggaatcca
aggagatcatcaactcctaagcccaaaggcacagcctctagaggatatgctccaagacct
gctgcggaatccagcacgaagaagattgaacagagcagcactgatgaaggtgatcttgcc
agaagcaatgtgatgctcggtagtgcaggaatagagcagacaggtactgcagaagaatca
tctgaggtcgacctctcaggaaatgttcccagcagcgaggcactggagggagtgaatgag
actgagaatgaggaagagattgaccaaaagctgccaccagcattgtcttccacatccatg
gatgctgagtcaattagtgaagcagcagatcagacaagtaccgttgaagaagcatctgag
gtggacttctcaggaaatgtttctagcagcacggcactggagggagtgaatgaggctgag
gctgaagaaaaggtcgaccagaagcagacttcagcattggcttccacctccatggatgtt
gagtcaattgacagagaacttgaggagtaccgtggcaaaataagtgcactggtggcttca
aaccctgggccatcatctcttgctagcaatcaaggacaggacaaaccaatttttggtgtt
catgagcaagacaaatcggtaattaatttccatgagcaaggcatatcaattgttgatgtt
tccaaacaaagtcagttggctgttggtgtcactgaagaagatccaacgaaacaaaccacc
ataattggtgaacaggatatcgctgaagaagcagtggaggatatagacagcaaatttttt
gaggatgggcagcttgctttatcagaagatgatgctgggacaagtaaatatgcgcaagaa
gagccttcagttgctggtgatcaactgaggatatcggaagatggacatgatgaaccagag
attcaagaactggtacagaaggatgttaatcttcaagtgctaaagcgaaggcttgaagag
cttgctaatgaaaactactcgatcgggtataagtgttttgtttttcctgaaatagtgaaa
gctgattcagttattgatctttacttaaatcgtagcatcactgccttagccagtgagtcc
actattcttataaaaggggcattcaatggttggagatggaacctttttactgaaaaaatg
catagaagtgaactagccggggattggtggtgttgcaagctccacataccaaagcaggca
tacagattagactttgtgttctttaatggtgacactgtctatgaaaataacaattataat
gattttttcatagaaatagaaagtgacatggatgaacactcatttgaggacttcttggtc
catgaaaagcaaagggaacttgaaagacttgctgcagaagaagctgaaagggaaagacag
gctgaggaggagcgccggaaggaggaagaaagggccattatggaggcttatagggcacaa
gcaaaggctgaagttgagacgatgaagaatagattgcagcatgtgttgggttcagccagc
agacacatggataatctatggtatatagaacctagcacatataaaggaggtgatagggtc
agattatactacaaccgaaacttgagaccactaatgcatagcaatgagatttggctccat
gggggttacaacaactggactgatgcactttctattgctgaaagactagtcaaatctcat
gaaaaagacggtgattggtggtatgcaaatgtcactttacccaaaagtgcattggtgttg
gactgggtttttgctgatggaccacctgggaatgcaaggaattatgataacaatggaaag
cgagatttccatgctgttgtttcaaagagcatatctgaggactttttttgggtggaagaa
gaacacaggatatttaaaagatttcaacgagaaagaaaagaaagggaggatgcggatcgg
agaaaggctgaaataactgcaaaaatgaaagctgagatgaaggagaagactatgagagag
tttcttctctcacagaaacacatcgtgtatactgagccactcgaagtgcgtgcaggaacc
accgtggatgtcctatacaatccttctaacacagttctgaatggaagccccgaagtttgg
ttcagatgttcctttaaccgttggactcatccaagtggtcctttgccaccgcaaaagatg
gtgaatgcagaaaatggttctcacttacaagctaccgtcagggttcctttggatgcatat
atgatggactttgttttctccgagtcggaagaaggcggaacatatgacaaccgaaatgga
atggactatcatattcctgtgtctgattccatggcaaaggaaccacctatgcatatcgtg
cacattgcagtagaaatggctcctattgcaaaggttgggggtcttggtgatgttgttact
agtctttcacgagctattcaagatttgggccacaaggttgaggttattattccgaagtat
gactgtttaaacttaagcaatgtgaaggatttacactgttgtcaaagttttacttggagt
ggtacagaaataaaagtatggtttggaaaggttgaagacatctctgtttatttcctggaa
ccacagaatgggatgttttgggttggatgtgtctatggaaggaatgatgaaagcagattt
ggcttcttctgtcattctgccctggagtttctccttcagagtggttcttctccagatatc
atacattgtcatgattggtcaagtgctccagttgcttggctgtacaagcaacagtatgtt
cataatgggttgccaaatggtcgggtggtatttaccatccacaatcttgaatttggagca
aatcaaattggcaaggcaatggcgcattgtgataaggctacaaccgtttcgtacacatat
tcaagggaagtgtctagacatggttctattgctcctcactatttcaaattccatggcatt
cgtaatggaattgattcagatatttgggatccctataatgacaactttatcccggtccat
tatacttctgacaatgttgttgaaggcaagagctccgcaaaaaaggcattgcaggagaag
cttggattacaccaaactgatagccctgtagttggaattatcagtaggcttacagcccag
aagggaattcatctcatcaaacatgcaatttatcgaactcttgaacggaatgggcaggtg
gttttgctaggctcagctccagatcatcgcatacaaagtgactttaccaacttagcccgt
aaacttcatggtgaatttgatggccgggtgaagctttgtttgacttatgatgagccactg
tcacatttgatatatgctggtgccgactttattctcgttccttccattttcgaaccttgt
ggtttaacgcaacttaccgccatgcgatatggatccatcccaattgttcggaaaactgga
ggcctttatgacactgtttttgacgtcgatgatgataaggagcgagcccgtgaacaaggc
ctagagccgaacgggttcagttttgaaggagctgatatcaatggcgtagattatgctctt
gacagggcgatcaccacatggtacgatgctcgcgattggttccactccctctgcaagcgg
gtcatggagcaagattggtcctggaaccgccctgctctggactacatggaactgtaccat
tctgctcgcaaaaactga
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