Brachypodium distachyon (stiff brome): 100825327
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Entry
100825327 CDS
T01717
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER
KO
K21444
poly(rC)-binding protein 3/4
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100825327
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
100825327
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
RemA-like
MFS18
Motif
Other DBs
NCBI-GeneID:
100825327
NCBI-ProteinID:
XP_014757236
UniProt:
A0A0Q3IC61
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All DBs
Position
3:35671841..35675234
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AA seq
447 aa
AA seq
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MADPAAATTEVGALASPPPPAVEEDDAPEEEEAVPEVKRWPGWPGDSVFRMVVPVLKVGS
IIGRKGELIKRLVEETKARVRVLDGPVGATERVVLVSGKEEPGLDLPPAMDALIRVFKRV
NGITDVAADSTTQTAAPPGVCAARLLVPGAQAINLIGKQGASIKAIQEGTGATIRVISID
ERERPFYVTDDERIVEIQGETEKVLKALQAVSNHLRKFLVDHSVLPLFEKTNAPVSQDRS
ADTWADMPHHSIVSTQVNQQPEVRDEYILPMKREHLYLEREPLVDHNIHRSGVSLYGRDP
ALSALRPSGMHSVGPLLTQITQTMQIPLTYAEDIIGVKGANIAYIRANSGAVVTIQESLG
SPDDITVEIKGTSSQVQAAQQLIQDSLAAHREPVRSSYAGLDPVYRSSYSQYSSSAYPSS
SLPSYSSMDGSGYSSSGLGGYGSTYRY
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccccgccgccgccactacagaggtcggggcactcgcttcgcctcccccgccg
gccgtcgaggaggacgatgcgccggaggaggaggaggccgtcccggaggtgaagaggtgg
cccgggtggccaggggacagcgtgttccggatggtggtaccggtgctgaaggtcggcagc
atcatcgggaggaagggagagctcatcaagcgcctcgtcgaggagaccaaggccagggtc
cgcgtcctcgacggccccgtcggcgccaccgagcgcgttgttttggtgtctggaaaagaa
gaaccaggcttggacctgcctccagctatggatgctctgattagagtttttaaacgtgtt
aatggaataaccgatgtagctgctgacagtactacccagacagctgctccacctggtgta
tgtgctgcgcgattgttggttcctggagctcaagcaattaacctcattgggaagcaaggt
gcttcaattaaggcaatccaggagggcacgggtgctacaatacgggttatatcaatagat
gagcgagagcggcctttctatgtaactgacgatgaaaggatagttgagatacagggtgaa
acagagaaagttctaaaagcactgcaagcagtttctaatcatctccggaagtttttggtt
gaccatagtgtacttccattgtttgaaaaaactaatgccccagtaagtcaggaccgcagt
gctgatacttgggctgacatgccacatcattcaattgtttctacacaagtaaaccaacaa
cctgaagtgcgtgatgaatatatacttccaatgaagagggagcatctttatcttgaacgg
gaacctctggtagatcataacattcatcgctcaggtgtgtcactttatgggcgggatcct
gccttgtcagcattgcgaccttctggaatgcatagtgttggccctctccttacacagata
actcaaaccatgcagatcccacttacctacgcggaagatatcatcggagtgaaaggagca
aacattgcatacatacgagctaatagtggtgctgttgtcacaattcaagagagtttggga
agccctgatgatataactgttgaaataaaggggacatcatcccaggtacaagccgcccaa
cagctcatccaggactccttggctgcacacagagaacctgtgaggagcagctatgcagga
ttagatccggtgtataggtcgagctactcgcagtatagcagctcggcttatccctcatca
tcgctgccatcttattctagcatggacgggagcggatattcctcatcaggtcttggtggt
tatggctccacttatcggtactag
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