Brachypodium distachyon (stiff brome): 100825589
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Entry
100825589 CDS
T01717
Name
(RefSeq) transcription initiation factor IIB-2
KO
K03124
transcription initiation factor TFIIB
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100825589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100825589
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
100825589
Prokaryotic type
Archaeal type
TFB
100825589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
HTH_Tnp_ISL3
Cyclin_N
HTH_AsnC-type
Ribosomal_S27e
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
100825589
NCBI-ProteinID:
XP_003565964
UniProt:
I1HGV3
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All DBs
Position
2:15776535..15777882
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AA seq
338 aa
AA seq
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MYCSAADERVYCTDCHRATEVVLDHGTGDTICTDCGMVLDEHYIDEGQEWRVFGDDSAGG
EDRDPCRVGSAGDPFLRGDGLLSTCIVHSAKSKSRSRSGSDPAAALHLPRMMLDVGGPAP
DTALVDAFRGIADMADRLGLVATIRDSAKQTFKRLEEAKGCPRGARSRDAVYAACLYVAC
RKEGMPRTYKELASVTAQGAAARKDIGKMTTHIKKLLGEEDGQVLDIGVVRATSYLRRFC
SILGLGNQQMLAAQEAVSRLEMELDVRRNPESIAAAIIYMVVQRAGARRSVKDVSAATGV
AEGTIKEAHKDLVPHTELLFAERPPRGSSARPAPAAGH
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtactgctcggcggcggacgagcgggtgtactgcacggactgccaccgcgcgacggag
gtggtgctcgaccacggcaccggcgacaccatctgcaccgactgcggcatggtcctggac
gagcactacatcgacgagggacaggagtggcgcgtcttcggcgacgacagcgctggcggc
gaggaccgcgacccctgccgcgtcggctcggccggcgaccccttcctccgcggcgacggc
ctgctctccacttgcatcgtccactcggccaagtccaagtcaaggtccaggtccgggtcc
gacccagccgccgccctgcacctgcccaggatgatgctcgacgtcggcggcccggccccc
gacacggcgctcgtcgacgcgttccgcggcatcgccgacatggcggaccggctggggctc
gtggccaccatccgggactcggccaagcagacgttcaagcggctcgaagaggccaagggg
tgcccgcgcggcgcccggagccgcgacgccgtctacgccgcctgcctctacgtcgcctgc
cgcaaggaaggcatgcctcggacgtacaaggagctggcctccgtcacggcgcagggggcg
gcggcgcgcaaggacattggcaagatgacgacacacatcaagaagctgctcggggaggag
gacggccaggtgctcgacatcggcgtcgtgcgcgccaccagctacctgcgccgcttctgc
tccatcctcggcctcggcaaccagcagatgctcgccgcccaggaggccgtgagcaggctc
gagatggagctcgacgtgcgccgcaaccccgagtccatcgccgccgccatcatctacatg
gtcgtgcagcgcgccggcgcccgcaggtccgtcaaggacgtgtccgccgccaccggcgtc
gccgagggcaccatcaaggaggcgcacaaggacctcgtcccgcacacggagttgcttttc
gctgagcgcccgccgcgcggttcttccgcgcgccctgctcctgctgcaggccattaa
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