Brachypodium distachyon (stiff brome): 100825650
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Entry
100825650 CDS
T01717
Name
(RefSeq) ubiquitin domain-containing protein DSK2a
KO
K04523
ubiquilin
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100825650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100825650
03051 Proteasome [BR:
bdi03051
]
100825650
Membrane trafficking [BR:
bdi04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
100825650
Proteasome [BR:
bdi03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
100825650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Dsc3_N
TSC22
Rad60-SLD_2
CSTF2_hinge
Motif
Other DBs
NCBI-GeneID:
100825650
NCBI-ProteinID:
XP_003558889
UniProt:
I1HA42
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All DBs
Position
1:73176735..73181914
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AA seq
532 aa
AA seq
DB search
MGGDEGEGGESTGAPPATLHIRGASGNKFAVQADLGTTVGAFKAIVAQSCDVPAPQQRLI
YKGRILKDEQTLASYGVDTDHTIHMVCGAAPPATAAAPAAANHGTSTTTTANTSPAGLGG
LLQGLGATGTAGTGLGLPGSGLAGLEQMQQQLTENPNLMREILNMPAMQSLMNNPDIMRD
MIMNNPQMRELIDRNPDLAHVLNDPSILRQTVEAARNPELMREMMRNTDRAMSNIESSPE
GFNMLRRMYETVQEPFLNATTMAGEGDRNPNPFAALLGNQGSNQARDPAGNAPTTASEST
TGSPAPNTNPLPNPWSANAGSAQGAARPSPASNARSATSGGLGLGGLGSADLGSMLAGGS
DASFLNQVLQNPTMMQMMQNIMSNPQSMNQLLNMNPNVRNMMESNSQMREMFQNPEFLRQ
LTSPETLQQLISFQQAMTSQLGQQQAGQERTQAGTGAGNVNLNTLMNMFSGLGGGLGVPN
APNVPPEELYATQLAQLQEMGFFDPQENIRALVATAGNVNAAVERLLGNFGQ
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgacgaaggagagggtggcgagtccacgggagccccaccggcgacgctgcac
atccggggcgccagcggcaacaagttcgcggtgcaggccgacctgggcaccaccgtcggg
gcgttcaaggcgatagtcgcccagagctgcgacgtgccagcgccgcagcagcggctgatc
tacaagggccggatcttgaaggacgagcaaaccctagccagctacggtgtggatacagat
cacaccatccatatggtgtgtggtgctgcaccaccagcaacagcagctgcaccggctgca
gccaaccatgggacttcaactactactactgcaaatacttcgcctgctggtttaggagga
ttgttgcaaggtctgggcgctacaggaactgctggaacggggttgggtttacctggctct
ggccttgcaggattggagcagatgcaacagcagttgactgagaatcccaacttaatgagg
gaaatattgaacatgccagccatgcagagtttaatgaacaaccctgatataatgcgtgat
atgattatgaacaatcctcagatgcgtgagctcattgatcgtaatccggatctggcacat
gtcctgaatgatccaagcatccttcgtcagactgttgaagcggctaggaatcctgagctt
atgagggagatgatgcggaacacagacagagcaatgagcaacattgaatcttctccagaa
gggttcaatatgctccgccgcatgtatgaaactgttcaagagccatttctgaatgcaaca
acaatggctggggagggtgatagaaatccaaacccgtttgcagctcttctaggaaaccag
gggtctaaccaagccagagatccagctggaaatgcaccaactactgcttcagagtccacg
acaggctctcctgctccaaatactaatccgcttccaaatccctggagtgcaaatgctggg
tctgcgcaaggagcggcaaggccttctcctgctagcaatgcaaggagtgccactagcggt
ggcctaggactaggagggttgggttctgcagatttgggaagtatgctggctggtggctct
gatgcttccttcttgaaccaggttttgcaaaaccctacaatgatgcaaatgatgcaaaat
attatgtctaatcctcagtccatgaatcagttgctcaacatgaacccaaatgtacgtaac
atgatggaatcaaattcccagatgagagaaatgtttcagaatccagaatttcttcgacag
ttgacgtctcccgaaacattgcagcaactgatttcattccagcaggctatgacgtcccaa
cttggtcaacaacaagctggccaggagcggacgcaagcaggaactggtgcaggcaatgtt
aacctcaacaccttgatgaacatgttcagtgggcttggtggtggtttgggtgttccaaat
gccccgaatgtgccaccggaagaactatatgcaacacagctagctcagctccaagaaatg
ggtttctttgacccacaggagaacatccgagcattggtcgccactgctggaaatgtgaat
gctgcagtggagcgacttcttgggaattttgggcaatag
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