Brachypodium distachyon (stiff brome): 100825680
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Entry
100825680 CDS
T01717
Name
(RefSeq) serine/arginine-rich splicing factor RS31
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100825680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100825680
Spliceosome [BR:
bdi03041
]
Common components
Common spliceosomal components
SR proteins
100825680
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
SET_assoc
RRM_fung
RBD_RDR6
Motif
Other DBs
NCBI-GeneID:
100825680
NCBI-ProteinID:
XP_003580336
UniProt:
I1IVQ1
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All DBs
Position
5:1406161..1410353
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AA seq
261 aa
AA seq
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MRPVFVGNLDYDTRHSELDRLFYRYGRIERIDMKSGFAFVYFEDERDGDDAIRALDGVPF
GPGRRKLSVEWSRGDRGTRRDDRDGYSKPPVNTKPTKTLFVINFDPINTRVSDIERHFDP
FGKISNVRIRKNFAFVQFETQEEATKALDATHSTKLLDRVISVEYAFRDDSEPGDRYDRP
IRGGGGGGGYGRQDDSSYRRSVSPVYRRSRPSPDYGRPRSPAELSPVYGSYDRSRSPVRD
RYRGRSPLRSRSPLANRRAYD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccgtgttcgtggggaacctggactacgacacccgccactcggagctcgaccgc
ctcttctaccgttacggcaggatcgagcgcatcgacatgaagtcaggatttgcttttgtc
tactttgaggatgagcgtgatggtgatgatgccatacgggctcttgatggtgtgcccttt
ggccctgggagacgcaaactttcagtggagtggtcacggggtgaccgcggtaccagacgt
gatgaccgtgatggctatagtaaaccacctgtgaatactaagcctactaagacactgttt
gtcattaactttgacccgatcaacacaagagtcagtgatattgaaaggcattttgatcca
tttggaaagatctcaaatgttcggataaggaagaactttgcttttgttcaatttgaaaca
caggaagaagccacaaaagccctcgatgctactcattctacgaagttattggacagagtg
atatctgttgagtatgccttcagggatgacagtgaaccaggtgacaggtatgacaggcca
attagaggtggtggcggcggcggcggctatggaaggcaggatgatagctcgtatcgccgt
tctgttagccctgtgtaccgaaggtcacgacctagtcctgactatggtcgtccaaggagt
cctgctgagttgagtcctgtgtatggttcatatgacaggagcagaagtcctgttcgtgat
cgctatcgaggccgatctcctctgcgctcaagatccccgcttgccaacaggagagcttac
gactga
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