Brachypodium distachyon (stiff brome): 100825761
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Entry
100825761 CDS
T01717
Name
(RefSeq) serine/arginine-rich splicing factor RS31
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100825761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100825761
Spliceosome [BR:
bdi03041
]
Common components
Common spliceosomal components
SR proteins
100825761
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
RRM_5
RRM_3
DUF2129
Motif
Other DBs
NCBI-GeneID:
100825761
NCBI-ProteinID:
XP_010229309
UniProt:
I1HAJ1
LinkDB
All DBs
Position
1:74061717..74065204
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AA seq
286 aa
AA seq
DB search
MRPVFCGNFDYDTRQADLERLFSKHGRIARIDMKSGYAFIYFEDERDAEDAIKRLANADF
GYNRRRLSVEWSRQVEPVPKNRDRPTGDAKPTRTLFVINFDPLRTKIQDIERHFEPYGKI
SNIRIRKNFAFVRYETQEEASVAVKHTDKSSILDRVLTVEYAFRDDDNERDDRYSSPKRG
DDRYSSPRRGDDRYVSTRRGDDRYVSPRRGDNRYGSPKRAERGRARGSPYMRSPSPRYRR
DYSPDYDRRPRNAGYDRPREGAPYGRSRSPVYARYDRGRSPGYGRY
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaggccggtgttctgcggcaacttcgactacgacacgcgccaggccgacctggagcgc
ctcttctccaagcacggccgcatcgcccgcatcgacatgaagtccggatatgcttttata
tactttgaagacgagcgtgatgcagaggatgcaataaagcggcttgccaatgctgatttt
ggctataacaggcgcaggctctctgtagagtggtcaaggcaagttgaaccggtgccgaag
aaccgtgataggcctacaggggatgcaaagccgacgagaaccctctttgttatcaacttt
gaccccctccgcacaaaaatccaagacattgagaggcattttgaaccgtatggaaagatc
tctaacattcgaattcgaaagaacttcgctttcgtacggtatgagacacaggaggaagcc
agcgtagcggtcaagcacactgataagagctcgatattggatagggtactgactgttgaa
tacgccttccgggatgatgacaatgaaagagatgacagatacagcagtcccaagcgaggt
gatgatagatacagcagtcccagacgaggcgacgacagatatgtcagtaccagacgaggt
gacgacagatatgttagtcccagacgaggtgataacagatatggcagtccaaaaagagct
gagcggggcagggcccgcggtagtccttacatgcgctcccctagccctaggtaccgaaga
gattacagtccagattatgaccgccgtccacgtaatgccggatacgatcgtcctcgtgag
ggagcaccatatggtaggagcagaagccctgtctatgcccgttatgacagaggcaggagc
cctggctatggtcgttactag
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