Brachypodium distachyon (stiff brome): 100825772
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Entry
100825772 CDS
T01717
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03030
DNA replication
bdi03410
Base excision repair
bdi03420
Nucleotide excision repair
bdi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100825772
03410 Base excision repair
100825772
03420 Nucleotide excision repair
100825772
03430 Mismatch repair
100825772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdi03032
]
100825772
03036 Chromosome and associated proteins [BR:
bdi03036
]
100825772
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100825772
DNA replication proteins [BR:
bdi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100825772
DNA Replication Termination Factors
ELG1-RFC complex
100825772
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100825772
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100825772
Check point factors
HRAD17(Rad24)-RFC complex
100825772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
Mg_chelatase
AAA_assoc_2
AAA_14
AAA_16
AAA_5
AAA_11
ResIII
AAA_24
SLFN-g3_helicase
AAA_2
PhoH
nSTAND3
AAA_30
AAA_23
AAA_19
AAA_25
AAA_28
AAA_7
DNAX_ATPase_lid
IstB_IS21
DUF3853
RNA_helicase
Cdc6_lid
bpMoxR
TIP49
Parvo_NS1
NB-ARC
Motif
Other DBs
NCBI-GeneID:
100825772
NCBI-ProteinID:
XP_003578842
UniProt:
I1ITY1
LinkDB
All DBs
Position
4:complement(45327059..45331306)
Genome browser
AA seq
339 aa
AA seq
DB search
MAPLIPSSQPWVEKYRPRQVKDVAHQEEVVRVLTNTLQTADLPHMLFYGPPGTGKTTTAL
AIAYQLYGPELYKSRVLELNASDERGINVVRTKIKDFAAVAVGTARKGGYPCPPYKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEDVMTN
RILHICHEEGLTLDAQALSTLSAICQGDLRRAITYLQSAARLFGSSISSTDLISVSGAIP
EDIVKSLLGACKSGEFDVANKEVSSIIADGYPVSQLLSQFLDVIVNADDIPDEQKARICK
KLGEADKCLVDGADEYLQLLDMASETIRALFNIPQGLVF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctcatcccgtcgtcgcagccatgggtggagaaataccgcccgaggcaggtg
aaggacgtcgcgcaccaggaggaggtggtccgggtgctcaccaacacgctccagaccgcc
gacctgccgcacatgctcttctacggcccgcctggcacggggaagaccaccaccgcgctc
gccatcgcctaccagctctacggcccagagctctacaagtcaagagttttggaacttaat
gctagtgatgagcggggaattaacgtggtgaggacgaagatcaaggattttgctgctgtg
gctgttggtactgcacggaaaggtggttatccctgcccaccatataagattattatactt
gatgaagctgattcgatgacagaagatgcccagaatgcattgaggcgtactatggaaact
tattccaaagtaacaagattctttttcatctgcaattatatcagcaggataatagagcca
cttgcatcaagatgtgcaaagtttaggttcaagcctctttcagaagatgtgatgaccaac
cgcattttgcatatatgccatgaagaagggctcactcttgatgctcaggcattatccaca
ttaagtgccatctgtcaaggagatctgcgtcgtgctataacttatcttcagagtgcagct
cgcttatttggatcttctatttcttccaccgacttgattagtgtttcaggggctatccct
gaagatattgtcaagtcattactgggggcatgcaagtctggtgaattcgatgtggcaaac
aaggaagttagcagtattattgcagatggatatccagtttcccagctgctctcacagttt
ctagatgtgattgttaatgcggatgatattccagatgagcaaaaggcaagaatatgtaaa
aagcttggggaagctgataagtgtttggtcgatggggcggatgagtatttgcagctttta
gatatggccagcgagactattcgtgctctgttcaacatcccacaagggctggtcttctga
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