KEGG   Brachypodium distachyon (stiff brome): 100825845
Entry
100825845         CDS       T01717                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100825845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bdi03019]
    100825845
Messenger RNA biogenesis [BR:bdi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100825845
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     100825845
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 100825845
NCBI-ProteinID: XP_003575180
UniProt: I1IAP4
LinkDB
Position
3:47892699..47895196
AA seq 128 aa
MSWAGPEELFLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEL
YCDVPLGLYVIRGENVVLIGELDREKDELPAHMTCVSEAEIRRAEKAEREARDLKGSMRK
RMEFLDFD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggccggcccggaggagctcttcctctccacctccctcgccggctttttggac
aagaaacttatagttctactacgagatggaaggaaactgctcggcaccctgtgttccttt
gatcagtttgcaaacgttgttctccaaggtgcttgtgaacgagtaatcgttggggaactg
tattgcgatgttcctcttggtctttacgtcatccgtggagagaatgttgttttaatcggt
gaattggaccgcgagaaggatgaactccctgctcacatgacctgtgtttcagaggcagaa
ataagaagggctgagaaagcggaaagagaagcaagagatcttaagggctcaatgaggaaa
cggatggagttcctagactttgattag

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