Brachypodium distachyon (stiff brome): 100825912
Help
Entry
100825912 CDS
T01717
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100825912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100825912
03110 Chaperones and folding catalysts [BR:
bdi03110
]
100825912
03029 Mitochondrial biogenesis [BR:
bdi03029
]
100825912
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bdi04147
]
100825912
Enzymes [BR:
bdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
100825912
Messenger RNA biogenesis [BR:
bdi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
100825912
Chaperones and folding catalysts [BR:
bdi03110
]
Heat shock proteins
HSP60 / Chaperonin
100825912
Mitochondrial biogenesis [BR:
bdi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
100825912
Exosome [BR:
bdi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100825912
Exosomal proteins of other body fluids (saliva and urine)
100825912
Exosomal proteins of breast cancer cells
100825912
Exosomal proteins of colorectal cancer cells
100825912
Exosomal proteins of bladder cancer cells
100825912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
100825912
NCBI-ProteinID:
XP_003567994
UniProt:
I1HH23
LinkDB
All DBs
Position
2:16167177..16172325
Genome browser
AA seq
576 aa
AA seq
DB search
MYRAAAAAISGSSSALRRQLARGEQRQWARGYAAAKEVTFGVGARAAMLRGVNDLADAVK
VTMGPKGRNVIIERAHKSPQVTKDGVTVAKSIEFEDSAKNVGASLVKQVADATNKVAGDG
TTCATVLTQAILTEGCKALAAGVNVMDLRIGINKAINAITSHLKSKAWTINSPDEINQVA
TISANGEKEIGDLISKAMEIVGKDGVITIVDGKTLDNELEAVQGMKLSRGYISPYFVTDQ
KTKKCEMENPLILIHDKKISNMNSLLPALQISIQNRRPLLIFAEDIEGEALSMLVMNKHR
AGLMICAVKAPGFGENRRANLDDMAVLTGGQVVSEDQGLDLGKVKLQMLGTAKKVTVSLD
DTIILDGGGDRQQIEERCQQLRESFESSTAMFDKEKAQERLSRLSGGVAILKIGGASEAE
VGEKKDRVTDALNAARAAVEEGIVPGGGVALLYATKVLDKISTSHEDEKIGVQIIKNALK
APLMTIAANAGVDGAIVIGKLLEQDNPSLGYDAAKEEYVDMVKAGIIDPVKVIRTALQDA
ASVSLLMATTEAAVSELPATKARLASRMPQMSGMGF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgggcggcggcggcggccatttcggggtcctcctcggcgctgcggaggcagctc
gcgcgcggcgagcagcggcagtgggcgcgcgggtatgcggcggcgaaggaggtgaccttc
ggcgtcggcgcccgcgccgcgatgctgcggggcgtcaacgacctcgccgacgccgtcaag
gtcaccatgggccccaaggggcgcaatgtgatcatcgagagagcccataaatctccgcag
gtcacaaaggacggggtcactgtcgcaaaaagcatagagttcgaggacagcgctaagaat
gtcggggcaagcctggtgaagcaagttgctgatgctactaataaggttgcaggagatggt
accacttgcgcaactgtacttacacaagcaattcttacggaaggatgcaaggctttggca
gcaggggtgaatgttatggacttgcgtattggtataaacaaggccataaatgctatcact
tctcacctcaaaagtaaagcatggacgattaattccccagatgaaataaaccaggtagct
accatttctgcaaatggtgaaaaggaaattggagatttaatatcaaaggctatggaaata
gttggaaaagacggagtcattactattgtcgatggcaaaacattggacaatgagcttgaa
gcagtacagggaatgaagctgtctagaggctacatatctccttacttcgtgactgatcag
aagactaagaaatgtgagatggaaaatcctttgattcttattcatgacaaaaaaatctca
aacatgaattcacttcttccagcattgcaaatttctatccagaatcgcagacctcttctc
atttttgctgaggatatagagggagaagcactatcaatgcttgtaatgaacaagcatcgt
gctggactcatgatatgtgcggttaaagctcctggatttggtgaaaacagaagggccaat
ctggatgacatggctgttttgacaggagggcaggttgttagtgaggaccaaggtcttgat
cttggtaaagttaaattacaaatgcttggcacagctaagaaggttactgtatcgcttgat
gatactatcattctagatggtggaggtgacaggcaacagatagaagagaggtgtcaacag
cttagagaatcatttgagagcagcactgctatgttcgacaaagaaaaggctcaagagcgt
ttatcgaggttatctggaggtgttgccatcctcaagatcggtggagctagtgaagctgaa
gttggtgagaaaaaagatagggtaacagatgctctaaatgctgcaagagctgctgtggag
gagggtattgtacctggtggtggagttgcccttttatatgccaccaaggtgcttgacaag
attagcacgtcacatgaggatgaaaagattggagttcaaattatcaagaatgctttgaag
gcccctctgatgaccatagctgcaaatgctggggttgatggtgccatagttattgggaag
ctactggaacaagataatcctagtttgggatatgatgcagcaaaagaggagtatgttgac
atggtcaaggctgggatcatcgaccctgtgaaagtgatacgaactgcacttcaagatgca
gcaagcgtttctctgctgatggcaaccaccgaggctgcagtgtctgagctcccagcaact
aaggccaggcttgcgagtcgcatgccgcagatgagcgggatgggtttttga
DBGET
integrated database retrieval system
