Brachypodium distachyon (stiff brome): 100825913
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Entry
100825913 CDS
T01717
Name
(RefSeq) chaperone protein ClpB1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
bdi03110
]
100825913
Chaperones and folding catalysts [BR:
bdi03110
]
Heat shock proteins
HSP100
100825913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_18
AAA_14
bpMoxR
nSTAND3
AAA_7
IstB_IS21
ATPase_2
TniB
AAA_28
TsaE
DUF815
NACHT
NBD_SMAX1
RNA_helicase
Zeta_toxin
AAA_19
Mg_chelatase
ResIII
ABC_tran
AAA_25
DNA_pol3_delta2
T2SSE
DUF87
DUF2987
DASH_Spc19
MoCoBD_1
DUF4426
Motif
Other DBs
NCBI-GeneID:
100825913
NCBI-ProteinID:
XP_003568082
UniProt:
I1HHI3
LinkDB
All DBs
Position
2:17196627..17200267
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AA seq
912 aa
AA seq
DB search
MNPDNFTHKTNEALVAAHEAASEAGHAQITPLHLAASLAGDKSGILRQAIAQASGGDPAA
GDSFERVLSGALKKLPSQSPPPDSVPASTALIKAIRRAQSAQKKRGDSHLAVDQLLLGLL
EDSQISDCLKEAGVSASRVRAELEKLRGGDSRKVESASGDTNFQALKTYGRDLVEQAGKL
DPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLLDVRL
IALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAAN
LFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVADTISILRGLKEKY
EGHHGVRIQDRAIVVAAQLSSRYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLER
KRIQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLTMKYRKEKERIDEIRKLKQ
RREELQFTLQEAERRMDLARVADLKYGALMEIDAAIAKLEGETGENLMLTETVGPEQIAE
VVSRWTGIPVTRLGQNDKERLVGMADRLHTRVVGQTEAVNAVAEAVLRSRAGLGRPQQPT
GSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEE
GGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTS
NLGAEHLLAGMVGKNSMKVARDLVMQEVRRHFRPELLNRLDEIVVFDPLSHEQLRKVARL
QMKDVAVRLAERGIALAVTDAALDVILSLAYDPVYGARPIRRWIEKRVVTQLSKMLIQEE
IDENCTVYIDASANKDELAYRVDRSGGLVNAETGQRSDILIQVPNGAVGGGEAAQAVKKM
RIMEEDGMDEDV
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgacaacttcacgcacaagaccaacgaggcgctggtggcggcacacgaggcg
gcgtcggaggccgggcacgcgcagatcacgccgctgcacctggcggcgtccctggcgggg
gacaagtccgggatcctgcggcaggcgatcgcgcaggcgtccggcggggacccggccgcg
ggggactcgttcgagcgcgtgctgagcggcgcgctcaagaagcttccctcgcagtccccg
ccgccggactccgtgccggcgtccacggcgctcatcaaggccatccgccgcgcgcagtcc
gcgcagaagaagcgcggggactcccacctggccgtcgaccagctgctgctcggcctcctc
gaggactcccagatctccgactgcctcaaggaggccggcgtgtcagcgtcccgtgtgcgc
gccgagctcgagaagctccgcggcggggacagccgcaaggtcgagtccgcgtccggcgac
accaacttccaggcgctcaagacgtacggccgcgacctcgtggagcaggccgggaagctc
gaccccgtcatcggccgcgacgaggagatccggcgcgtggtgcgcatcctgtcgcgccgc
accaagaacaacccggtgctcatcggcgagcccggcgtcggcaagacggccgtcgtggag
ggcctcgcgcagcggatcgtgcgcggggacgtgcccagcaatctcctcgacgtccgcctc
atcgcgctcgacatgggcgcgctcgtcgccggcgccaagtaccgcggcgagttcgaggag
cggctcaaggccgtgctcaaggaggtggaggaggccgaggggaaggtgatcctcttcatc
gacgagatacacctcgtcctcggcgctggcaggacggagggctccatggacgccgccaac
ctgttcaagccgatgctcgccaggggccagctccggtgcatcggcgccaccacgctggag
gagtaccggaaatacgtcgagaaggacgccgcgttcgagaggcggttccagcaggtgtat
gtcgccgagcccagcgtggccgacaccatcagcatcctcagagggctcaaggagaagtac
gaaggccatcacggtgtcaggatccaggaccgcgccattgtcgtcgccgcccagctctcg
tcaagatacatcatgggccggcacctgcctgacaaggccatcgacctggtagacgaggcg
tgcgcgaacgtgagggtgcagctggacagccagccggaggagatcgacaacctcgagcgg
aagaggattcagctggaggtggagctccacgcgctggagaaggagaaggacaaggccagc
aaagcccggctggtcgaggtccggaaagagctcgacgacctgcgggacaagctgcagcca
ctgacgatgaagtacaggaaggagaaggagcggatcgacgagatccggaagctgaagcag
cggcgggaggagctgcagttcacgctgcaggaggccgagcggcgcatggacctggcccgc
gtcgccgacctcaagtacggcgcgctcatggagatcgatgccgccatcgccaagctggag
ggggagaccggggagaacctgatgctcaccgagaccgtcggccccgagcagatcgccgag
gtggtcagccggtggaccggcatccccgtgacccggctcgggcagaacgacaaggagagg
ctcgtcggcatggccgaccggctgcacacgagggtcgtcgggcagacggaggccgtgaac
gccgtcgccgaggcggtgctgaggtcgcgggccggcctcggcaggccgcagcagcccacc
gggtccttcctcttcctcggcccgaccggcgtcggcaagacggagctcgccaaggccctt
gcagagcagctgttcgacgacgagaacctgctcgtccgcatcgacatgtccgagtacatg
gagcagcactccgtcgcccgcctcatcggagcaccacctggctacgttgggcatgaggaa
ggagggcaactgacggagcaggtgaggaggaggccgtacagcgtgatcctgttcgacgag
gtggagaaggcgcacgtggcggtgttcaacacgctcctccaggtgctcgacgacggccgg
ctgaccgacgggcaaggcaggacggtggacttccggaacaccgtgatcatcatgacctcc
aacctcggcgccgagcacctcctcgccgggatggtggggaagaactccatgaaggtcgct
cgcgatctcgtcatgcaggaggtgaggaggcacttccggccggagctgctgaaccggctg
gacgagatcgtggtgttcgaccctctgtcccatgagcagctcaggaaggtcgcccgtctt
cagatgaaggacgtggccgtccgcctcgccgagaggggcatcgccttggccgtcaccgac
gccgcgctggacgtcatcttgtccctggcttacgacccagtgtatggggcgaggccgatc
aggaggtggatcgagaagagggtggtgacgcagctgtccaagatgctgatccaggaggag
atcgacgagaactgcacggtgtacatcgacgcgtcggccaacaaggacgagctggcctac
agggtggaccggagcggcgggctggtgaacgccgagacgggacagaggtcggacatcctc
atccaggtgcccaacggcgccgtcggcggcggcgaggccgcgcaggccgtcaagaagatg
aggatcatggaggaggacggcatggacgaagacgtctga
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