Brachypodium distachyon (stiff brome): 100825919
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Entry
100825919 CDS
T01717
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100825919
04121 Ubiquitin system [BR:
bdi04121
]
100825919
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100825919
Membrane trafficking [BR:
bdi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100825919
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100825919
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-C3HC4
zf-ANAPC11
Rad50_zn_hook
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
100825919
NCBI-ProteinID:
XP_003569102
UniProt:
I1HMZ5
LinkDB
All DBs
Position
2
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AA seq
410 aa
AA seq
DB search
MASSPAAANTASASYWCYSCDRFVRAAVPEGGSAADVSCPGCGGGFLEEMGAPPPARSSS
AAATAAYLRRPRAHHANDLRLRRSRRAAAAAAAAAAAAAASGAAGGGDRAPFNPVIVLRR
SSPAGAGGDEDDDGGSLAAASSFELFYDDGAGSGLRPLPESMSDFLMGSGFERLLGQLAH
IEAAGLARARETPPASKAAVESMPTVTIAASHVSADCHCAVCKEPFEFGAEAREMPCAHI
YHPDCILPWLQLRNSCPVCRHEMPTDAARSRASNAGTEEETVGLTIWRLPGGGFAVGRFA
GGRRPEERELPVVYTEMDGGFNNGGAPRRISWGARQSQSTERSAIRRFFGNVFACFGRGH
SSSSQASSSQMRPDELNEASDHSAAFSHGSRSRSMSWRLEDGHADTMVQR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctctccggcggctgccaacacggcgtcggcgtcctactggtgctacagctgc
gaccgcttcgtgcgggccgcggtcccggagggcgggtcggcggctgatgtatcttgcccc
ggctgcggcggcgggttcctcgaggagatgggggcgccgccgcccgcccgctcctcctcc
gccgccgcgaccgctgcgtacctccgccgcccgcgcgcgcatcacgccaacgacctgcga
ctccgccggagccgccgcgccgccgccgccgccgctgcagctgcagcagcagccgccgcc
tctggtgccgcgggtggcggtgaccgcgcaccgttcaacccggtcatcgtgcttcggcgc
tcgtcccctgccggagcggggggagacgaggacgacgacggcgggtccctcgccgcggcg
agcagcttcgagctcttctacgacgacggggccggctccggcctccgcccgctgccggag
agcatgtccgacttcctcatgggctccggcttcgagcggctcctcggccagctggcccac
atcgaggcggctggactcgcccgcgccagggagaccccgccggcgtccaaggccgccgtc
gaatccatgcccaccgtcaccatcgccgcctcccacgtcagcgccgactgccactgcgcc
gtctgcaaggagccgttcgagttcggcgccgaggcccgggagatgccctgcgcgcacatc
taccacccggactgcatcctcccctggctgcagctccgcaactcgtgccccgtgtgccgg
cacgagatgcccacagatgccgcgcggtcgcgggcgagcaacgccgggaccgaggaggag
actgtcgggctgaccatctggaggctgcctggaggcggattcgctgtcgggaggtttgcc
ggcgggaggaggcctgaggagagagagcttccggtcgtttacacggagatggatggtggt
ttcaacaacggcggcgcgccgaggaggatctcatggggggccaggcagagccaatcgact
gagaggagcgccattagacgctttttcggtaatgtgttcgcgtgctttgggcgtgggcat
tcgtcgagttctcaggcttcctcctctcaaatgaggcctgatgagctgaacgaggcgtcg
gatcattctgctgcgttcagccatggctcaagaagccggagcatgagctggaggttggaa
gacgggcacgccgacacgatggtgcaaagatag
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