Brachypodium distachyon (stiff brome): 100825927
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Entry
100825927 CDS
T01717
Name
(RefSeq) homeobox-leucine zipper protein ROC8
KO
K09338
homeobox-leucine zipper protein
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bdi03000
]
100825927
Transcription factors [BR:
bdi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
100825927
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
100825927
NCBI-ProteinID:
XP_003570542
UniProt:
I1IEQ3
LinkDB
All DBs
Position
3
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AA seq
713 aa
AA seq
DB search
MEYGDDLAVAAGSDAAVAQRRKKRYHRHTPRQIQQLEATFKECPHPDENQRMHLSRELGL
EPRQIKFWFQNRRTQMKAQHERADNCFLRAENDKIRCENIAMREALKNVICPTCGGPHTN
DDYFDEHKLRMENAHLKEELDRVSSLTSKYLGRPITQLPSSMQQSLSMSSLDLSMGAAAA
AMGGPSLDLDLLSGGGSSSGMPAAFQPVSDMERPMMADMATRAMDELIRLAQAGDHVWAK
ADNGGCCREVLSVDAYDTVFGKPGGSRGPDVHVEGSRDSCLVLLPAHALVDIFMDSSKWA
DFFPTIVAKARTVDVLVSGMAGRSESLVLMQEELHVMTPVVPTRELCFLRYCRQIEQGLW
AVADVSVDLLQQRDHAAASRYYGAPPQARARKLPSGCLIADMSNGYSKVTWVEHMETTEG
DNKNPINPLYRDLVLSGAAFGAHRWLAALQRACDRHACLVAASMPHRDIAAGVTAEGKRS
MMRLSERMVSSFCGSLSASQAHRWTTLSGPGSSGGGGDDVGVRVMVHRSTDPGQPNGVVL
SAATSIWLPVPCDRVYAFVRDENTRSQWDVLSHGNPVQEVSRIPNGSHPAASSISLLRGL
NASQNSMLILQESSTDATGSQVVYAPIDLPAANVVMSGEDPSAIPLLPSGFTILPDGSGG
PGSGSLVTVAFQILVSSLPSSRLNEESVATVNSLIGTTVEQIKAALNCSTTTH
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggagtacggcgacgacctggccgtggcggcgggctccgacgccgccgtcgcccagcgc
cggaagaagagataccaccgccacaccccgcgccagattcagcagctcgaggcgacgttc
aaggagtgcccgcacccggacgagaaccagaggatgcatctgagccgggagctggggctg
gagccccggcagatcaagttctggttccagaaccgccggacgcagatgaaggcgcagcac
gagcgtgctgacaactgcttcctgcgcgcggagaacgacaagatccggtgcgagaacatc
gccatgcgtgaggccctcaagaacgtcatctgccccacctgcggcgggcctcacaccaac
gacgactacttcgacgagcacaagctccgcatggagaatgcccacctcaaagaagagctt
gacagggtgtcgagcctgacgtccaagtacctgggccgccccatcacgcagctcccgtcg
tcgatgcagcagtccttgtccatgtcgtcactggacctgtccatgggcgccgccgcagcg
gccatgggcggcccgtcgctggacctggacctcctcagcggcggcggctcgtcgtctggg
atgccggcggcgttccaacccgtctcggacatggagcggcccatgatggccgacatggcc
accagggccatggacgagctcatccggctcgcgcaggccggcgaccacgtctgggccaag
gccgacaacggcggatgctgccgggaggtgctcagtgtcgacgcctacgacaccgtcttc
ggcaagcccggcggcagccgcgggcctgatgtgcacgtcgagggctcccgcgactcctgc
ctcgtgctcttgcccgcccacgccctcgtcgacatcttcatggactcgagcaaatgggcg
gacttcttccccaccatcgtggccaaggcgcgcacggtggacgtcctcgtcagcggcatg
gccggccggagcgagtctttggttctgatgcaggaggagctgcacgtgatgacgccggtg
gtgccgacgcgggagctgtgcttcctgcgctactgccggcagatcgagcaagggctgtgg
gcggtcgcggacgtgtccgtggacctgctgcagcagcgcgaccacgccgccgcgtcccgg
tactacggcgcgccaccgcaagcccgcgcgcggaagctcccgtccggatgcctcatcgcc
gacatgtccaacggatactccaaggtcacctgggtggaacacatggagaccacggagggc
gacaacaagaaccccatcaacccgctctaccgcgacctcgtcctcagcggcgcggcattc
ggcgcgcaccggtggctcgcggcgctccaaagggcttgcgaccgccacgcgtgtctcgtc
gccgcctcgatgccgcaccgcgacatcgccgccggagtgacggcggaagggaagaggagc
atgatgaggctgtcggagcggatggtgagcagcttctgcgggagcctgagcgcgtcgcag
gcgcaccggtggacgacgctttcgggcccggggtcgagcggcggcggcggcgacgacgtc
ggggtgcgcgtcatggtgcaccggagcacggacccggggcagcccaacggcgtcgtgctc
agcgccgccacatccatctggctccccgtcccctgcgaccgcgtctacgccttcgtccgc
gacgagaacacacgatcccagtgggacgtgctgtcgcacgggaacccggtccaggaggtg
tcgcgcatccccaacggctcgcacccggccgcgagctccatctccttgctcagaggcctg
aacgcgagccagaacagcatgctgatcctgcaggagagcagcacggacgcgacggggtcg
caggtggtgtacgcgccgatcgacctcccggcggccaacgtggtgatgagcggcgaggac
ccgtcggcgatcccgctgcttccctcggggttcaccatcctccccgacggcagcggcggc
cccggctcggggtcgctcgtcaccgtggcgttccagatcctcgtcagcagcctgccgtcg
tccaggctcaacgaggagtccgtcgccaccgtcaacagcctcatcggcaccaccgtcgag
caaatcaaggccgccttgaattgctccaccaccacccattga
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