Brachypodium distachyon (stiff brome): 100825967
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Entry
100825967 CDS
T01717
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi00100
Steroid biosynthesis
bdi00909
Sesquiterpenoid and triterpenoid biosynthesis
bdi01100
Metabolic pathways
bdi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
100825967
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
100825967
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bdi01006
]
100825967
Enzymes [BR:
bdi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
100825967
Prenyltransferases [BR:
bdi01006
]
Terpene biosynthesis
Squalene/phytoene synthase
100825967
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
100825967
NCBI-ProteinID:
XP_003559279
UniProt:
I1GLZ8
LinkDB
All DBs
Position
1:complement(3246146..3252123)
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AA seq
403 aa
AA seq
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MEAVWEAVALVKLRVAAGRVKLQIPPQEEEEHWAFAYDMLQKVSRSFAFVIQQLGPDLRN
AVCIFYLLLRALDTVEDDTSIPTEVKLTILQEFHRHVYNPSWHYSCGTGNYRVLMDKFRY
VSTAFLELDQGCQEAIKEITKRMGEGMSKFICKEVETVDDYDEYCHYAAGLVGYGLSRLF
HAAGTENLASDQLSNSMGLFLQKIHIIGDYFEDISEIPKRRMFWPREIWSKYVEKLEDLK
YKENSEKAVQCLNDMVTNALIHAKDCLQYMSALKDDTVFRLCAIPQIMAMGNFAICYNNV
NVFRGLVKMRHGLTARVIDETKSMSDVYTAFYEFSSLLESKIDDNDPSAALTRKRVDAIK
KTCKSSGLLKRRGYDLEKPKYMPVLIMLALMLAAVVLGVLYAK
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtgtgggaggcggtggcgctggtgaagctgcgggtggcggcggggcgggtc
aagctccagatcccgccgcaggaggaggaggagcactgggccttcgcctacgacatgctc
cagaaggtctcccggagcttcgcgttcgtcatccagcagctcggacccgacctgcgcaat
gccgtgtgcatcttctacctcctgctccgagctctggacactgttgaggatgacactagc
atccctaccgaggtgaagctgacgatccttcaggaattccaccgccatgtctacaaccct
agctggcattattcatgtggaacagggaactacagagtgctgatggataagtttagatac
gtctccactgctttcttggagctggatcaaggatgtcaagaggcaatcaaagaaatcact
aagcgaatgggagaaggaatgtcaaaatttatatgcaaggaggttgaaactgttgacgac
tatgatgagtactgtcactatgcagcagggctagtgggatatggactttccaggctcttt
catgctgctgggacggaaaatctagcttcagatcaactttcaaattcaatgggcttattt
ctgcagaaaatccatataataggggattattttgaggacataagtgagataccaaagcgc
cgtatgttctggcctcgagaaatatggagtaaatatgttgagaaacttgaggatttgaaa
tataaggaaaattcagaaaaggcagtgcagtgcttgaatgatatggtgactaatgctttg
attcatgccaaagattgccttcaatacatgtctgcgttgaaggatgataccgttttccgt
ttatgtgcaatacctcagataatggctatgggaaactttgctatctgctacaataatgtg
aatgtctttcgaggacttgtgaagatgaggcatgggcttactgcacgagtaattgatgaa
acaaaatcaatgtcagatgtctatactgctttctacgagttttcttcattgctagagtcg
aagattgatgataatgatccaagtgctgcgctaacacggaaacgtgtggatgcaataaag
aaaacttgcaagtcatccggtttgctaaagagaaggggatatgacttggaaaagccaaag
tatatgcctgtgctgatcatgcttgcacttatgttggctgctgttgtcttgggtgtactg
tatgccaagtaa
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