Brachypodium distachyon (stiff brome): 100825991
Help
Entry
100825991 CDS
T01717
Name
(RefSeq) trafficking protein particle complex II-specific subunit 120 homolog isoform X1
KO
K20306
trafficking protein particle complex subunit 9
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100825991
Membrane trafficking [BR:
bdi04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
100825991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC9-Trs120
Motif
Other DBs
NCBI-GeneID:
100825991
NCBI-ProteinID:
XP_014751342
LinkDB
All DBs
Position
5:18389901..18397606
Genome browser
AA seq
1218 aa
AA seq
DB search
MEPGLSIESGSAIRVAVLPVGGPIPPQCLRDYAALVAQHARVDLASLRPYYSEHQKSPFS
HQPWDTGCLRLKFVLGGCVPSPWEDFQSSRKVLAVVGICHLPSSPDLGKVAADFVDAART
YPSALASRCFAFCPTDAQLAEKKSDGIIMFPPSDQKSLELHMLTMIQDLAASLLMEFEKW
VLRAESTGTILKTPLDSQSSLGSEEVHTLGVPSILTSVIKAKKRRLGRAQKIIGDYCLLA
GSPADANAHYTTAIDLARLTGDVFWHAGALEGIVCALVVDRMGQSDPVLEDEVKYRYYTI
IQLYRRATLQDNAQRVSPVSFELEAALKLARHLCRRELAKEVSDLLMGAADGAKALIDAS
DRLILYIEIARLFGSLGYKRKAAFFSRQVAQLYLQQDNAYAAMSAMQVLTMTTNAYHVQS
RKTSKSDHASPKELGASNSNADSGKVHPQSVVSLFESRWSTLQMVVLREILMSSIRAADP
LTSWSAAARLLRSFYPLITPAGQSGLASSLANSADRLPWGTRCADPCLPFIRLHSLPLHP
SQRDIVKRNPHKKEWWIGAGPSGPFIYTPFTKGGTSGTSKQEINWIVGEPVQVMVELANP
CSFDLVVESIYLSVHSGNFDAFPVSVNLPPNTSKLVLLSGIPTRVGQVSIPGCIVHSFGV
ITEHLFKEVDCLLLGATQGLVLSDPFRCCGSSKFKSVNFPSISVVPPLPLLVANVVGGDG
SILLYEGEIRDVLITLTNAGTVPVEEANIALSGKNQDSVISIAHSTWKSALPIKPGGEVT
FKVTLRAWHLSLTDLEADVGRSPTNSRRTQREGINPFLNIHYAGPANQGNGEVSLPPGRR
LVVPLNICVVQGMRLVRARLLSMEIPARFSEAHLRPVSDKDNMSNGSDMVHNDISLLKID
PYKGSWGLRLLELELFNPTDVVFDVDVSVHLDGTNGEQTLNVTADAACHKTRIDRDYSAR
VLIPLENFKLPVLDASFFVKENGSDEPLGSKAATIAEKNAKAELNASINNLISKIKVRWH
SGRNSSGELNIKDAIQAALQASIMDILLPDPLTFSFRLAKDGTMAKTVSASANDFSHSTN
ENACPSTGESVLRCKDPISAHEMTHMEVQIRNNTKEIIRMNLSISCKDVAGENCFDENSA
TVLWAGVLSDIQVEVPPLQELVHPFSVYFLVPGDYSLQASSVIIDATDVLRARAKAESPD
EPILCRGSPFHIHVVGTA
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgggctgagcatcgagtccggttccgccatccgcgtggcggtgctgccggtg
ggcgggccgatcccgccgcagtgcctgcgggactacgcggcgctggtcgcgcagcacgcg
cgcgtggacctcgcctcgctgcggccctactactcggagcaccagaagagccccttctcg
caccagccctgggacacgggctgcctccgcctcaagttcgtgctcggcggctgcgtaccc
tcgccgtgggaggacttccagtcctcgcgcaaggtgctcgccgtcgtcggcatctgccac
ctcccgtcctccccggacctcgggaaggtcgccgcggacttcgtagacgccgcgcggacc
tacccatccgcgctcgccagccgctgcttcgccttctgccccaccgacgcgcagctggcg
gagaaaaagagtgatggcattattatgttccctccttctgatcagaaatcgctggaactt
catatgcttacaatgatccaagatcttgctgcttcattgttgatggagtttgaaaaatgg
gtcttacgtgcagaatctactggaactattttgaagacacctttggactcacaatccagt
cttggctcagaggaggttcatactttaggtgttccgagtattttgaccagtgtgataaag
gctaaaaaaagaaggctgggccgtgcacaaaagataataggagattattgcttattggct
ggatcacctgctgatgctaatgcacattacaccacggctatagatcttgcaagattgaca
ggagacgttttctggcatgctggagcccttgaaggtattgtctgcgcattggtggttgat
aggatgggccaaagtgatcctgttttggaagatgaagtaaagtatcgttattacacaatt
atccagctatacagaagagcaactttacaagataatgcacaaagagtttcacctgtgagc
tttgagcttgaagccgcattgaagttggcaagacatttgtgcagacgcgaacttgccaag
gaagtgtcagatttattaatgggtgctgcagatggtgccaaggctctgattgatgccagt
gatcgattgatactgtacattgaaatcgcacgactttttggttctcttgggtataaacgc
aaggcagcatttttttccagacaagttgcacagttgtaccttcagcaagacaatgcatat
gctgctatgagtgcgatgcaggttctaaccatgactacaaatgcataccatgttcaaagc
aggaagactagcaaaagcgatcatgcttcgcccaaggaacttggtgccagcaacagcaat
gctgattctggaaaagtgcatcctcagtctgttgtgtcattgtttgagtcacgatggagt
acccttcaaatggttgttctaagagagatattgatgtcttcaatccgcgctgctgatccc
ctcacgtcgtggagtgccgcagctcgtcttcttcgatcattttacccgctcatcacccca
gctggtcagagtgggctggcaagctcacttgcaaactctgctgataggcttccatggggc
acacgttgtgccgatccatgtcttccttttatcaggttacattctttgccacttcaccct
tcacaaagagatatagtaaagcgcaacccacataaaaaggagtggtggattggtgcaggt
ccttcagggccttttatttatacacctttcaccaagggaggaacatctgggactagcaaa
caagagataaattggattgttggagaaccagttcaagttatggtagagttagcaaacccc
tgcagctttgacctagttgttgagagcatttacctctctgttcattctggaaattttgat
gcctttccagtcagtgttaatcttcctccaaacacctccaaattggtactgctatctgga
atcccaacacgagttggacaagtatcaattcctgggtgcattgttcacagttttggtgta
attacagaacacctattcaaagaggttgactgtttgctccttggagctacacaagggctt
gttctttctgatcctttcagatgttgtggctctagcaagtttaagagtgttaacttcccg
agcatttctgttgttcctcccttgcctttgttagttgccaatgttgtgggtggagatggt
tctatccttttatatgaaggtgaaattcgtgatgttttaataacactgacaaatgctgga
actgtaccagttgaagaagcaaatattgcattatcagggaagaatcaggattctgtcatt
tcaattgcccatagcacatggaaatctgcacttcctataaaaccaggtggagaagtgaca
tttaaagtgacattaagagcctggcatcttagcttgacagacctggaagcagatgttggc
agatctcctacaaattcaaggagaacacaaagagaaggaatcaatcctttcttgaatatt
cactatgccggtcctgcaaaccaaggtaatggtgaggtttctcttccacctgggaggcgc
cttgtcgtcccattgaacatttgtgttgtacagggcatgcgccttgtaagagcacgcctg
ttatccatggaaatacctgccaggtttagtgaagcgcacctaagacctgtcagtgacaaa
gataatatgagcaatggaagtgatatggtgcataatgacattagcttgttgaagattgat
ccttataaaggaagttgggggcttcgccttctggaacttgagcttttcaaccctacggat
gttgtttttgatgttgatgtttctgtccatttggatgggacgaatggagagcaaacgtta
aatgtcactgcggatgcggcttgccacaaaaccagaattgaccgtgactattctgccagg
gttctcatacctctcgagaacttcaaattacctgttcttgatgcttctttctttgtgaag
gaaaatggaagcgacgagccacttggatccaaagctgccaccattgcagaaaagaatgcc
aaggcagagttaaatgcttctatcaacaacttgatttcaaaaataaaagtgaggtggcat
tctggcagaaatagctcaggtgagctgaatatcaaagatgctattcaagcagcattgcaa
gcatctataatggacatattgttgcctgatcccttgacatttagctttagacttgctaag
gatgggactatggccaaaactgtttctgcgtctgccaacgatttcagtcattccactaat
gagaatgcttgtccatctactggtgagagtgttctgaggtgtaaagatcctatatcagct
catgaaatgactcatatggaagttcaaattcgaaacaacacaaaggaaattattcggatg
aacctcagcatttcatgcaaagatgttgcaggagaaaattgcttcgatgaaaatagtgct
accgtcctctgggctggtgttcttagcgacatacaggtggaggttccaccattacaggag
ctggtacatcctttctctgtctacttcctagtacctggagactactcgctgcaagcttct
tctgttataattgacgccacagatgttcttcgtgcgcgggcaaaggcagagtcaccggat
gaacctattctatgccgtggatcgccattccatatccatgtagttggtacagcgtag
DBGET
integrated database retrieval system
