Brachypodium distachyon (stiff brome): 100826005
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Entry
100826005 CDS
T01717
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100826005
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100826005
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
100826005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING-like
zf-RING_Vps41
RINGv
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
100826005
NCBI-ProteinID:
XP_003581575
UniProt:
I1J129
LinkDB
All DBs
Position
5:22806579..22808059
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AA seq
359 aa
AA seq
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MASNSFSPPSPPYYTVPADSVDSPASDSVTSALLIIFALLFFVCLASIAIHTFLRYLSRS
SSSDSLPPLPQTDRTRRAETGNDDPAAAERKDEAGDEKQRLIESLPRFTMASALAALPKS
SPDCAVCLSPFTPDAELRLLPACRHAFHAACVDAWLRAAAPTCPLCRAAVTLQHPSVAAI
LAAAAQPPPGPETRMSSSREYRSRSFRVEMGSVVSSRGSSPAAAGSDSRTYSLGSFDYHI
DEEVEAVVPRTARADITKEEKPSAAPGTPSPPGEAVAEAAGSSPSTRGWLRDYLDRFTSS
ASSSFSFSGRWSSRWSQNNQGQRNEEPWLWDTEAAAVPAAGSDEEETAFMVLYRWIAAV
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaactcattctcgcctccctcgccgccgtactacaccgtccccgccgactct
gtcgacagccccgcctctgactccgtgacttccgccctcctcatcatcttcgctctcctc
ttcttcgtctgcctcgcttccatcgccatccacaccttcctccgctacctctcccgctct
tcgtcctctgattcgcttccgccgctcccccagacggatcgtactcgccgcgccgagaca
gggaatgatgatcctgctgcggcggagaggaaggatgaagcgggcgacgagaagcagcgg
ctgattgagtcgctgccccggttcaccatggcgtcggcgctggcggcgctgccgaagagc
tccccggactgcgccgtctgcctgtcgcccttcaccccggacgccgagctccgcctgctc
ccggcctgccgccacgcgttccacgccgcctgcgtcgacgcgtggctccgcgccgccgcc
ccgacctgcccgctctgccgcgccgccgtgacgctccagcacccctctgtcgccgccatc
ctcgcggccgccgcccagcccccgccggggccggagacgaggatgagcagcagcagagag
taccggtccagaagcttccgcgtcgagatgggcagcgtcgtcagcagccgcggctcgtcc
cctgccgcagccggcagcgacagccgcacctactcgctcggctccttcgactaccacatc
gacgaggaggtcgaggccgtcgtgccccgcacggcgcgcgccgacattaccaaggaagag
aaaccttcggcggctccggggacgccatcgcctccaggggaagcggtggccgaagcggca
gggtcgtcgccttcgacgcgtggctggctaagggactacttggaccgctttacctcctcg
gcctcgtcatcgttctccttctccgggcggtggagctcccggtggagccagaacaatcaa
ggccagaggaacgaggagccgtggctgtgggacacagaggcggcggcggtgccggcggcg
gggtcggacgaggaggagacggcgttcatggtgctgtaccggtggatcgccgcggtataa
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integrated database retrieval system