Brachypodium distachyon (stiff brome): 100826108
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Entry
100826108 CDS
T01717
Name
(RefSeq) protein CHROMATIN REMODELING 5
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100826108
03036 Chromosome and associated proteins [BR:
bdi03036
]
100826108
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
100826108
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
100826108
SLIK complex
100826108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
HTH_CHD1_Hrp3
CHD1-like_C
ResIII
HDA2-3
DEAD
SLIDE
Chromo_MIT1
KH_PARP14_5
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
100826108
NCBI-ProteinID:
XP_003562521
UniProt:
I1GRJ0
LinkDB
All DBs
Position
1:15138746..15151874
Genome browser
AA seq
1734 aa
AA seq
DB search
MAFFSNSGSRADSGGYNLNEKAEDESAYESVGDRDVDLNSSQWNLNEKAEDGYHSEEEQC
EAVQPGPISSENKSGQNARRVGGPSGPWGTNFLKDCRPAQSVKEDPSNSDRGMEDGSVAS
SHDDMDGSGDEGELNRGHGEVPAEEMLSDDYYEQDGEDQSDSLHRGGMSHPSCSSSGVAA
KAVPLRQKKKSTKYNAYDDDNEDAYNDDNDDDDDADEDDPDDVDFEPDSETDKAAVKDKL
VDSENSAEEDDDELELSDDDDEDEDDFIENRRQSKRLKVGGIKASQRRKPPMQPLRKRGA
SFTDEEYSSGKDSDVPNDADFSRRPKKPDRLHQKTVFRNNVLSNVSSNNESRTSGRRRTQ
KNISYAESEDSDDSEEKSTKQQKLLKEDQDEEDGETIERIIWYQPKGIAEDALRNDQSTQ
PTVMSMASDFDEHWDDVEFYIKWKGQSYLHCQWKTLSELRSVSGFKKVLNYMKRVTEEQR
YKRSLSREEVEVHDVGKEMELDLIKQYSQVERVFADRASKVDGDGLVPEYLVKWQGLPYA
ESTWEKDTDIEFAQEAIDEYKAREVATAVLGKTVDFQRKKSKASLRRLDDQPEWLKGGKL
RDYQLEGLNFLVNGWRNDTNVILADEMGLGKTIQSVSMLGFLHNAQEINGPFLVVVPLST
LSNWAKEFRKWLPDMNVVVYVGNRASREMCQQHEFFTNKKGGRHVKFHTLITTYEVILKD
KAVLSKIKWNYLMVDEAHRLKNSEASLYIALLEFSTKNKLLITGTPLQNSVEELWALLHF
LDPVKFNSKDTFVERYKNLSSFNETELANLHKELRPHILRRVIKDVEKSLPPKIERILRI
EMSPLQKQYYKWILERNFQNLNKGVRGNQVSLLNVVVELKKCCNHPFLFESADHGYGGDS
IGDRNKVERIVMSSGKLVLLDKLLVRLRETNHRVLIFSQMVRMLDILSEYLSLRGFQFQR
LDGSTRADLRHQAMEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ
AMSRAHRIGQQETVNIYRFVTCKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKETKK
GASMFDKNELSAILRFGAEELFKEDKTDEETKRKLESMDIDEILERAEKVETKAAEGEEG
NELLSAFKVANFSSGEDDATFWSRLIQPDAADMVQETLAPRAARNKKSYVEDHQLEKNSN
RKRRAVEAQEKTRRRSNRAVDTMVSLPLIDGAVAQVREWSFGNIPKKDASRFVRAVKKFG
NPSQIGLIVDDVGGAIAKAPCEAQIELYDLLIDGCNEAVKENTDIKGTVLDFFGVPVKAY
ELLARVEELQCLAKRIARYKDPVRQYRIQSPYKKPQWSASCGWIETDDARLLLGIHWYGY
GNWEKIRLDSKLGLTTKIAPSTLGERETFLPRAPNLDNRASALLQKEYSNLSGKSSKARG
GASQTVNNETNGGARSLRGRQKDLKPKDDNKSNKDDIKKRKVVEPEAREEGEISESEAET
KYRLDKEEKWLEWCSEVLDDEQDILKRLDRLQNTSVNLPKEKVLSRIRRYLQIIGEKIGK
VIVQHGESYKQSRMASRLWNYVATFSNMSGEQLRDLYLKLSQDQMEAGVGPSHGSNFQSV
PPNRGGASNQPHPSRNQRSTRSLQHTPESLNNGENTGNSEAWKRRRRADSDNQFDNQPLY
QPPPIITNGNRLQESSSSAGILGWGPVEARRYGNDRPKRGVHPSHFPAGHGPLL
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atggcattcttcagcaattccgggagcagggctgattcaggagggtacaacttgaacgag
aaggctgaagatgaaagtgcatacgagtctgttggggatagggacgttgacctgaactct
agccagtggaacttgaatgagaaggccgaagatgggtaccacagtgaggaggagcaatgc
gaagctgtccagcctggtccgatttcttctgagaataaatcagggcagaatgcccggaga
gtaggtggtccatctggcccatggggtacaaactttttgaaggattgcagacccgcacag
tcggttaaggaagacccgtcaaatagtgataggggaatggaagacgggtctgtagctagc
tcacatgatgacatggatggcagtggagacgaaggtgagctaaacagagggcacggggaa
gtgcccgccgaagaaatgctttccgatgactattatgagcaggacggagaggaccagagt
gattcgttgcatcgtggtgggatgagccacccaagctgttccagttccggggtagcagca
aaagctgtccccttgagacaaaagaagaaatcgacaaaatacaatgcttatgatgacgac
aacgaagatgcgtataatgatgataacgacgatgatgatgacgcagatgaagatgatcca
gatgatgtggattttgagccagacagtgaaaccgacaaggcagctgttaaggataagctt
gtggacagtgagaactctgctgaagaagatgatgatgagcttgagctctccgatgatgat
gatgaagatgaagatgattttattgagaatagaaggcaatctaaacgacttaaggtcggg
ggaattaaagcatcacagcgaagaaagcctcccatgcagcctctacgcaaacgaggggca
tctttcacagatgaagaatattcttcaggaaaagattcggatgtacctaatgatgctgat
ttcagtcgccgaccaaaaaaacctgataggctgcatcagaaaactgtgttccgtaataat
gttttatcaaatgtcagttccaataatgagtctcggacttctggaaggaggaggacgcag
aagaatatctcatatgcagaaagtgaagacagtgatgatagtgaggagaagtcaactaaa
caacaaaagctcttgaaggaggaccaagatgaggaagatggagaaactattgaaaggatc
atttggtatcaaccaaagggcattgctgaggatgccctgaggaatgaccaatcaactcaa
cctactgtgatgagcatggcatcagattttgatgaacactgggatgacgtagagttttat
ataaaatggaaaggccagtcttacttacattgtcagtggaagacgttatctgagctccgt
agtgttagtggatttaagaaggttctaaattacatgaaaagagtgacagaggaacagagg
tacaagaggtcactatcacgcgaagaggtcgaggtgcatgatgtgggcaaggaaatggag
ttagatcttattaagcaatatagccaggttgaacgggtatttgctgatagggcaagcaaa
gtggatggtgatggtctagtacctgaatatttagtaaaatggcaaggtcttccttatgca
gaatcaacctgggaaaaagataccgatattgaatttgctcaagaagcaatagatgaatac
aaggcacgcgaagttgccacagctgtactggggaaaacggtcgatttccaaaggaagaaa
agtaaagctagtttgcggaggcttgatgatcaaccagaatggctaaaaggaggtaaactt
cgtgattatcagcttgaaggcctaaactttctcgttaacgggtggagaaatgacaccaat
gttattcttgctgatgagatgggtctgggaaaaacgattcagtctgtttccatgcttggc
ttcctccataatgctcaagaaattaatggtccatttctcgtcgtcgtgccactctcaaca
ttgtcgaattgggcaaaagagttcaggaagtggctgccagacatgaatgttgttgtttat
gtgggaaatcgtgccagcagagagatgtgccagcagcatgagtttttcacaaacaagaag
ggtggaaggcatgtaaaattccatacgttaattactacctatgaggtgatacttaaggac
aaagccgttctttccaagatcaagtggaactaccttatggttgatgaagctcaccggttg
aagaacagtgaagcatcgctgtatattgcacttttggaattcagcaccaagaataagctg
ctaataactgggacccctttgcagaatagtgttgaagagctttgggctctacttcatttt
cttgatccagttaaattcaacagcaaagatacttttgttgagagatacaaaaatttgagt
tcgttcaatgaaactgagcttgcaaatcttcacaaggaattgaggccccatattttaaga
cgagttataaaagatgtcgagaagtctttacctccaaaaatcgaacgaattcttcgtatc
gaaatgtctcctctacagaaacagtactacaagtggattctagagcgaaattttcagaat
ctgaataaaggagttcgtggcaatcaggtctcactcttgaatgtcgtcgtcgagttaaaa
aagtgctgcaaccatccattcttgtttgaaagtgctgatcatggttatggcggagatagc
attggtgatcgcaataaagttgaacgcattgttatgagtagtgggaagttagttttgttg
gacaagctgctagtaagactgcgggagaccaatcatcgtgtgcttatattctctcagatg
gttaggatgctggacatcctgtctgagtacctgtcccttcgaggattccagtttcagagg
cttgatggtagtacaagagcggatcttcgtcatcaagccatggagcattttaatgcgcct
ggaagtgatgatttttgttttcttctttctacacgcgctggtggacttggtattaatctt
gcaacagcagatacagtgataatttttgattcggattggaatcctcaaaatgatctacag
gcgatgagtagggcacataggattgggcaacaagaaactgttaacatctatcggtttgtc
acatgcaaaagtgttgaagaggatatattggaacgggcaaagaagaaaatggttcttgat
cacctagtgattcagaagctcaatgctgaggggcgacttgagaagaaagaaaccaaaaag
ggcgcctccatgtttgataagaatgaactttcagccatactgaggtttggtgcggaggag
ttgttcaaagaagataagactgatgaagagaccaaaaggaagcttgaaagcatggacatt
gatgaaattcttgagagagctgagaaggttgaaacaaaggctgctgaaggggaggaagga
aatgagcttctcagtgctttcaaggttgccaacttctcgagtggtgaggatgacgctaca
ttctggagtagactaatacaaccagatgctgcagatatggttcaggaaactctggcacct
cgtgctgcacgaaataaaaagagctatgttgaagatcaccaacttgaaaaaaatagcaac
aggaaaaggcgcgccgtcgaagcacaagaaaagacaagaaggcgttccaacagagcagtt
gacacaatggtttcgttaccattgattgatggagcagtagctcaagtacgcgaatggtca
tttgggaatataccaaagaaggatgcatcccgctttgttcgagcggttaaaaagtttgga
aacccaagccaaattggcttaattgtggatgatgttggtggtgcaatagcaaaagctcca
tgtgaagcacaaattgagctgtatgatttgctcattgatggctgtaatgaagctgttaaa
gagaatactgatatcaagggcactgtattggatttttttggtgtgccagtgaaggcctat
gagttgttggcccgggtcgaagagcttcagtgcttggcaaagcgtatcgcacggtacaaa
gatccagttagacaataccggatccaatcaccttacaagaagcctcagtggtcagcaagc
tgtggatggattgaaactgatgacgcaagattactgcttggaattcactggtatggttat
ggaaattgggaaaagatacggttggattcaaagcttggtctgacaacaaaaattgcgcca
tcaacacttggtgagagagagacatttttaccacgtgcaccaaacttggataatcgtgct
agtgctctgctgcaaaaggaatattccaatctgagtggaaagagctcaaaggccagagga
ggggctagccaaacagtcaataatgaaactaatggtggtgcaagatcgctgagaggccgg
caaaaagatctgaaaccgaaagatgataataagtcaaataaagatgatattaaaaaacgc
aaggtagtggaacctgaagcaagggaagaaggtgaaatttcagaatctgaagcagagact
aaatatcgtttggacaaggaggaaaagtggctcgaatggtgctctgaagttttggacgat
gagcaggacatattgaaacggctggataggctacagaatacaagtgtaaatctaccaaag
gaaaaggttctttcaaggattcgtaggtacctccagataattggtgaaaagattggaaag
gtcattgtccaacatggggaatcttacaagcaatcgcgtatggcctcaagattatggaat
tatgtggcaactttttcaaacatgtccggggagcaattgcgtgatctctatttaaaactt
agtcaggaccaaatggaagctggagtcggcccctcacatggtagcaattttcagtccgtt
cctcccaacaggggtggtgcttccaatcagcctcatccttctagaaaccaaaggtcgaca
aggtctcttcagcacactccagagtctcttaataatggtgagaacactgggaactcggaa
gcgtggaagcggcgtaggagagctgattcggataatcaatttgacaaccaacctttgtat
caacctcctccaatcataacaaatgggaacaggttgcaggaatctagcagttcagctggt
attcttggttggggtccagttgaagccagacggtatggcaatgatagaccaaaacgaggt
gttcatcctagccatttccctgccgggcatggtcctttgctttag
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integrated database retrieval system
