Brachypodium distachyon (stiff brome): 100826170
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Entry
100826170 CDS
T01717
Name
(RefSeq) syntaxin-121
KO
K08486
syntaxin 1B/2/3
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100826170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100826170
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bdi04147
]
100826170
Membrane trafficking [BR:
bdi04131
]
SNARE
Syntaxin (Qa)
Stx-PM
100826170
Exosome [BR:
bdi04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
100826170
Exosomal proteins of other body fluids (saliva and urine)
100826170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
ODV-E18
Synaptobrevin
DUF2116
Motif
Other DBs
NCBI-GeneID:
100826170
NCBI-ProteinID:
XP_003558056
UniProt:
I1GMH7
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All DBs
Position
1:complement(4265650..4267263)
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AA seq
318 aa
AA seq
DB search
MNNLFSSSWKRAGDGDLESGGVEMSAPPGAAAGASLDKFFEDVESIKDDLRDLDRIQRSL
HDGNESGKSLHDASAVRALRARMDADAAAAIKKAKVVKLRLESLDRANAANRSVPGCGPG
TSTDRTRTSVVAGLRKKLRDSMESFSALRARVSSEYRDTVARRYFTVTGAQPDEATLDTL
AETGEGERFLQRAIAEQGQGRGEVMGVVAEIQERHGAVADLERSLLELHQVFNDMAVLVA
AQGEQLDDIEGHVGRARSFVDRGREQLQVARKHQKSSRKWKFIAIGILLVIILVIVIPIV
LKNTKNSSSSNNSNQPQQ
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacctcttctcgagctcgtggaagcgcgcgggcgacggggacctggagtccggc
ggggtggagatgtcggcgccgccgggcgcggcggcgggggcgagcctggacaagttcttc
gaggacgtggagtccatcaaggacgacctccgcgacctggaccggatccagcgctccctc
cacgacggcaacgagtcggggaaatccctccacgacgcctccgccgtgcgcgcgctccgg
gcgcgcatggacgccgacgccgccgccgccatcaagaaggccaaggtcgtcaagctacgc
ctcgagtccctcgaccgcgccaacgccgccaaccgctccgtccccggctgcgggcccgga
acctccaccgaccgcacccgcacctccgtcgtcgccggcctccgcaagaagctccgcgac
tccatggagtccttctcggcgctccgcgcccgcgtcagctccgagtaccgcgacaccgtg
gcccgccgctacttcaccgtcacgggcgcccagccggacgaggcgacgctggacacgctg
gcggagacgggcgaaggggagcggttcctgcagcgcgccatcgcggagcaggggcaaggg
cgcggcgaggtcatgggcgtggtggccgagatccaggagcggcacggcgccgtggccgac
ctggagcgcagcctgctggagctccaccaggtgttcaacgacatggccgtgctcgtggcg
gcgcagggggagcagctcgacgacatcgagggacacgtcggccgggcaaggtccttcgtc
gaccgcggccgcgagcagctgcaggtggcgcgcaagcaccagaagagctcccggaagtgg
aagttcatcgccatcggcatcctgttagtcatcatactcgtcatcgtcatccccatcgtg
ctcaagaacaccaagaacagcagcagcagcaacaacagcaaccagccgcagcagtag
DBGET
integrated database retrieval system
