Brachypodium distachyon (stiff brome): 100826204
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Entry
100826204 CDS
T01717
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170 isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100826204
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100826204
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100826204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_3
zf-C3HC4
zf-RING_5
zf-C3HC4_4
zf-C3HC4_2
zf-RING_2
zf-RING_6
DUF6274
Motif
Other DBs
NCBI-GeneID:
100826204
NCBI-ProteinID:
XP_003562777
UniProt:
I1GL39
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All DBs
Position
1:1631233..1634253
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AA seq
197 aa
AA seq
DB search
MSASASSASSSASPVPPEDDVCSVCHDRFRIPCQANCSHWFCGECIIRVWNHGAAVQPCK
CPICRRLINLLVPANITEDQNDDPQLQRVLGEIQHYNHIFGGAPRSLTQRLQDLPFFMRR
LFRELMDPQRTLPLVFRARMILMVALSAVYVLSPVDILPESVLGLFGFFDDFLILVIVFL
HLAAVYRSLLLYRHGGH
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctccgcctcctccgcctcctcgtcggcgtcgccggtgccgccggaggacgac
gtctgctcggtgtgccacgaccgcttccggatcccctgccaggccaactgctcccattgg
ttctgcggggaatgcatcatccgtgtctggaatcatggagctgctgtacagccttgcaag
tgtcccatatgccgccgccttataaatctgctggtacctgctaatataacggaggaccag
aatgatgacccacaacttcaacgagttttgggagagattcagcactacaaccacatattc
ggtggagcaccacgcagcctgactcagaggttgcaagacctgccatttttcatgcgaaga
ctgttcagagaactaatggatcctcagaggaccctcccacttgttttcagggcgaggatg
attctgatggtggccctgagtgcagtttatgtcctgagcccggtcgacattcttcctgaa
agcgtgctggggttattcggattcttcgacgacttcctcatcctggtgatcgtgttcctc
caccttgccgctgtttaccggtcgttgcttctctaccgccatggtggccattga
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