Brachypodium distachyon (stiff brome): 100826226
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Entry
100826226 CDS
T01717
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bdi03036
]
100826226
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
100826226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mcl1_mid
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
Ctf4_C
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
EIF3I
WD_LRWD1
NBCH_WD40
Beta-prop_RIG_2nd
eIF2A
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_ELP1_1st
MIOS_WD40
SGL
RMC1_N
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
100826226
NCBI-ProteinID:
XP_003567995
UniProt:
I1HH24
LinkDB
All DBs
Position
2:16172899..16179888
Genome browser
AA seq
1012 aa
AA seq
DB search
MKGRALKLREAHKAGSPPVFCTAVWGPGGQHVVTACASDVAVLIHDAAAVAAGGGRGSDP
AAVVTTIRLHKDGVTALAVAPGSGGSLASGSIDHSVKFYSFPGGEFQGNVARFTLPIRSL
AFNRKGTLLAAAGDDDGIKLIATIDNTISKVLKGHKGSVTGLAFDPKNDYLASVDSFGTV
IYWDLCLGNVSRTLKRVAPTFGSDHSVKNGLCWSPDGQTLAVPGLRNNVVMYDRDTGEEV
FTLKGEHEQPVCSLCWSPNGRYLATASLDRQVLIWDVKSRQDIERQKFDERICSLAWKPE
ENALVLIDVTGKFAIWESVVPSTLKSPTEGAPDLNITRVPFFDDDDEEEKASTSAGFDDD
VDESLGELGPSSHKRLRRKSAFGDHSNGDNEDEDLIHHMESYKRTKHKHKDTKEDVGKAI
DDTATSGRFVTARMQVSFQPGATPSQPGKRNFLAYNMLGSITTIENEGHSHVEVDFHDTG
RGPRVPSMTDYFGFTMAALNESGSVFANPCKGDKNMSTLMYRPFSSWAGNSEWSMRFEGE
EVKSVALGAGWVAAVTSLNFLRIFTEGGLQMHILSVSGPVLTAVGHGDQLAIVFHSSDCL
PSGDQVLDVKVFNISEGAQAMSSRLVLTPSSQLSWFGFSENGQLSSYDSKGILRVFSSQF
GGSWLPVFSSMKARKSEDESHWVVGLDANNIFCVLCKSPDCYPQVMPKPVLSILEFSFPL
ASSDLGANNLENEFMMKRLHLSQIQKKIEEMAALGLDVTAFEDEAFNTEAALDRCILRLI
SSCCNGDKLTRATELAKLLTLGKSMKGALTLVTRLKLPILQEKFSSILEERMLNDTRTPG
AIGVCSSATTAKYSPSLTTHAIQPAKTVQNGNNMEASAAPALNPFSPQRSSAPGSKKAEV
EQLKEPKVTEKASPSVTPLAKMPKKNEKAQGIAKTNRDVTAVVEQLPKGVIDQVGVKNKS
NEDSNRVEPQRPVNPFAKPSSNKDKSSSLLDSIKKMKVENEKVDKSNSKVKV
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggcgcgcgctgaagctccgggaggcgcacaaggcggggtcgccgccggtcttc
tgcacggcggtgtgggggcccggaggacagcacgtcgtcaccgcctgcgccagcgacgtc
gccgtcctgatccatgacgccgccgcggttgctgctggcggcggccggggctccgatccg
gcagcggtcgtcaccaccatccggctccacaaggatggcgtcacggcgctcgccgtagcg
ccgggctccggcggctcgctggcttccggctccatcgaccactccgtcaagttctactcc
ttcccaggtggagagttccagggcaacgttgctcggttcaccctcccgatccggtcactc
gccttcaacaggaagggcacccttttagcagcggccggcgatgacgacggcatcaagctg
atcgcgacgatcgacaacacaatctctaaggtgctcaagggccacaagggctcagtcacc
ggactggctttcgaccccaagaatgattacttggcgtcagttgacagcttcggcacggtc
atctattgggatctttgcttgggaaatgtgtcgcgtaccttgaagcgtgttgccccaaca
tttggctccgaccactcagtgaagaatggcctgtgttggagtcctgatgggcaaaccctt
gctgttcccggattgaggaataatgtagtcatgtatgatagggacactggggaagaggtg
ttcacgctgaaaggagaacatgagcagccagtctgcagcctttgctggtcgccaaacggg
aggtacttggccactgctagcctggataggcaggtgctgatctgggatgtaaagtcgagg
caggacattgagaggcagaagtttgatgagaggatatgcagcttggcttggaaaccagag
gaaaatgctttagtgctgattgatgtgacgggcaaatttgccatttgggagtcggtagtc
ccttcaactttgaagtcgccgactgagggtgcacctgacctaaacataacaagagttcct
ttctttgatgatgacgatgaggaagaaaaggcaagcacatctgctggatttgatgatgat
gttgatgaaagtcttggagagctgggcccttccagtcacaagagattgaggaggaaatct
gcatttggtgaccactctaatggagataatgaagatgaggatttgatacatcatatggag
tcatacaagagaacaaaacataagcataaagatacaaaggaagatgttggtaaggcaata
gatgatacagccacttctggaaggtttgttacagcaagaatgcaggtttctttccagcct
ggtgcaacgccatcgcagcctggcaagcgaaattttcttgcatacaacatgcttggaagt
attactactattgaaaatgaggggcactcacatgtagaggttgatttccatgacacagga
agaggccctagagttccttccatgactgactattttggtttcacaatggctgcactaaat
gaatcaggaagtgtgtttgcaaatccatgcaagggtgacaagaatatgagcactcttatg
taccgtcccttcagtagctgggctggcaacagcgagtggtcaatgaggtttgagggagaa
gaagtgaagtctgtggctcttggtgctggatgggttgctgcagtcacaagtttaaatttt
ttgcgcatcttcacagaagggggcctgcagatgcatatcctctcagtcagtggtccagtg
ttgacagcagtgggtcatggagatcagctagcaattgtgttccactcttcagattgtctt
ccttcaggagatcaggtcctagatgttaaggtattcaacatatctgagggggcacaagca
atgtccagtcgccttgtgttgactccatcctctcaattatcttggtttggtttcagtgag
aatggccaacttagttcatatgactcaaagggaatactgagggtcttttctagccagttc
ggaggaagttggctccccgtgtttagttcaatgaaggcaagaaaatctgaagatgaaagc
cactgggtggtgggtttggatgctaataacatattctgtgtcctatgcaaatcccctgac
tgttatccacaggtaatgccgaagcctgttctaagtatactggagttttcatttcctctt
gcctcatctgaccttggagccaataatttggagaatgaattcatgatgaagaggctgcat
ctctcacagatccaaaagaaaatagaagaaatggctgctttgggtctggacgtgactgca
tttgaagatgaagcgtttaacacagaggctgcacttgaccggtgcatcttgaggctcata
tctagctgctgcaatggtgataagctgactcgagctaccgagcttgcaaaattactgaca
ctggggaaatcaatgaagggagcattaacacttgtaacacgcttgaaacttccaatatta
caagagaagttcagttcaatacttgaggagaggatgttaaatgatacaagaactccagga
gcaataggtgtttgctccagtgcaaccactgcaaagtactcaccatcgttgaccactcat
gcaattcaacctgctaaaactgtacagaatggaaataacatggaggcttctgcagcacct
gcactaaatcctttttccccacaacgaagcagtgcacctggatcaaagaaggcagaagta
gaacaactgaaagagccgaaggttactgaaaaggcttcaccatcagttaccccactagcc
aagatgcctaaaaagaatgaaaaggcacaagggatagcaaagacaaatagggatgtgaca
gctgtagtcgaacagcttccaaaaggtgtaatcgatcaggttggtgttaaaaacaagagc
aacgaagatagcaaccgggtagagcctcagcggccagttaacccctttgcaaaaccttca
tccaacaaagacaaatcatcgtcccttttggattccatcaagaagatgaaagttgaaaat
gagaaagttgataaatcgaacagcaaggtcaaagtctaa
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